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metexplore
MetExploreViz
Commits
96e08e43
Commit
96e08e43
authored
Jan 02, 2020
by
maxchaza
Browse files
Remove logs & import styles fix
parent
06b9abc3
Changes
12
Hide whitespace changes
Inline
Side-by-side
app/view/form/aStyleForm/AStyleForm.js
View file @
96e08e43
...
...
@@ -53,8 +53,6 @@ Ext.define('metExploreViz.view.form.aStyleForm.AStyleForm', {
listeners
:
{
beforeshow
:
function
(
tooltip
)
{
var
color
=
tooltip
.
target
.
el
.
dom
.
querySelector
(
"
#html5colorpicker
"
).
getAttribute
(
"
value
"
);
console
.
log
(
tooltip
.
target
.
el
.
dom
.
querySelector
(
"
#html5colorpicker
"
));
console
.
log
(
color
);
tooltip
.
update
(
color
);
}
}
...
...
app/view/form/aStyleForm/AStyleFormController.js
View file @
96e08e43
...
...
@@ -50,92 +50,100 @@ Ext.define('metExploreViz.view.form.aStyleForm.AStyleFormController', {
// As a result, render and afterrender can't be used on header
var
header
=
view
.
down
(
'
header
'
);
var
bypassButton
=
header
.
lookupReference
(
'
bypassButton
'
);
var
colorButtonBypass
=
header
.
lookupReference
(
'
colorButtonBypass
'
);
var
colorButtonBypassEl
=
colorButtonBypass
.
el
.
dom
.
querySelector
(
"
#html5colorpicker
"
);
var
numberButtonBypass
=
header
.
lookupReference
(
'
numberButtonBypass
'
);
if
(
header
){
var
bypassButton
=
header
.
lookupReference
(
'
bypassButton
'
);
var
colorButtonBypass
=
header
.
lookupReference
(
'
colorButtonBypass
'
);
var
colorButtonBypassEl
=
colorButtonBypass
.
el
.
dom
.
querySelector
(
"
#html5colorpicker
"
);
var
numberButtonBypass
=
header
.
lookupReference
(
'
numberButtonBypass
'
);
var
activeSession
=
_metExploreViz
.
getSessionById
(
metExploreD3
.
GraphNode
.
activePanel
);
if
(
activeSession
)
{
var
activeSession
=
_metExploreViz
.
getSessionById
(
metExploreD3
.
GraphNode
.
activePanel
);
if
(
activeSession
)
{
var
mapNodes
=
activeSession
.
getSelectedNodes
()
.
map
(
function
(
nodeId
)
{
return
activeSession
.
getD3Data
().
getNodeById
(
nodeId
);
})
.
filter
(
function
(
n
)
{
return
n
!==
undefined
});
var
mapNodes
=
activeSession
.
getSelectedNodes
()
.
map
(
function
(
nodeId
)
{
return
activeSession
.
getD3Data
().
getNodeById
(
nodeId
);
})
.
filter
(
function
(
n
)
{
return
n
!==
undefined
var
selectedNodes
=
mapNodes
.
filter
(
function
(
node
)
{
return
node
.
getBiologicalType
()
===
view
.
biologicalType
;
});
var
selectedNodes
=
mapNodes
.
filter
(
function
(
node
)
{
return
node
.
getBiologicalType
()
===
view
.
biologicalType
;
});
var
selection
=
d3
.
select
(
"
#
"
+
metExploreD3
.
GraphNode
.
activePanel
)
.
select
(
"
#D3viz
"
)
.
selectAll
(
"
g.node
"
)
.
filter
(
function
(
n
)
{
return
n
.
getBiologicalType
()
===
view
.
biologicalType
});
var
selection
=
d3
.
select
(
"
#
"
+
metExploreD3
.
GraphNode
.
activePanel
)
.
select
(
"
#D3viz
"
)
.
selectAll
(
"
g.node
"
)
.
filter
(
function
(
n
)
{
return
n
.
getBiologicalType
()
===
view
.
biologicalType
});
if
(
selectedNodes
.
length
>
0
)
{
bypassButton
.
enable
();
if
(
selection
){
if
(
selectedNodes
.
length
>
0
)
{
bypassButton
.
enable
();
if
(
selection
){
var
value
=
metExploreD3
.
GraphStyleEdition
.
getCollectionStyleBypass
(
view
.
target
,
view
.
attrType
,
view
.
attrName
,
view
.
biologicalType
);
if
(
value
===
"
multiple
"
||
value
===
"
none
"
)
{
bypassButton
.
show
();
numberButtonBypass
.
hide
();
colorButtonBypass
.
hide
();
var
value
=
metExploreD3
.
GraphStyleEdition
.
getCollectionStyleBypass
(
view
.
target
,
view
.
attrType
,
view
.
attrName
,
view
.
biologicalType
);
if
(
value
===
"
multiple
"
||
value
===
"
none
"
)
{
bypassButton
.
show
();
numberButtonBypass
.
hide
();
colorButtonBypass
.
hide
();
if
(
value
===
"
multiple
"
){
if
(
view
.
styleType
===
"
float
"
||
view
.
styleType
===
"
int
"
)
{
numberButtonBypass
.
fireEvent
(
"
setIcon
"
,
"
mapMultipleNumbers
"
);
}
if
(
value
===
"
multiple
"
){
if
(
view
.
styleType
===
"
float
"
||
view
.
styleType
===
"
int
"
)
{
numberButtonBypass
.
fireEvent
(
"
setIcon
"
,
"
mapMultipleNumbers
"
);
}
if
(
view
.
styleType
===
"
color
"
)
colorButtonBypass
.
fireEvent
(
"
setIcon
"
,
"
mapMultipleColors
"
);
if
(
view
.
styleType
===
"
color
"
)
colorButtonBypass
.
fireEvent
(
"
setIcon
"
,
"
mapMultipleColors
"
);
}
else
{
numberButtonBypass
.
fireEvent
(
"
setIcon
"
,
"
noneIcon
"
);
colorButtonBypass
.
fireEvent
(
"
setIcon
"
,
"
noneIcon
"
);
}
}
else
{
numberButtonBypass
.
fireEvent
(
"
setIcon
"
,
"
noneIcon
"
);
colorButtonBypass
.
fireEvent
(
"
setIcon
"
,
"
noneIcon
"
);
}
}
else
{
numberButtonBypass
.
fireEvent
(
"
setIcon
"
,
"
noneIcon
"
);
colorButtonBypass
.
fireEvent
(
"
setIcon
"
,
"
noneIcon
"
);
if
(
view
.
styleType
===
"
float
"
)
{
if
(
parseFloat
(
view
.
default
)
!==
parseFloat
(
value
)){
numberButtonBypass
.
show
();
bypassButton
.
hide
();
if
(
view
.
styleType
===
"
float
"
)
{
if
(
parseFloat
(
view
.
default
)
!==
parseFloat
(
value
)){
numberButtonBypass
.
show
();
bypassButton
.
hide
();
me
.
replaceText
(
numberButtonBypass
.
el
.
dom
,
parseFloat
(
value
));
}
me
.
replaceText
(
numberButtonBypass
.
el
.
dom
,
parseFloat
(
value
));
}
if
(
view
.
styleType
===
"
int
"
)
{
if
(
parseInt
(
view
.
default
)
!==
parseInt
(
value
)){
numberButtonBypass
.
show
();
bypassButton
.
hide
();
}
if
(
view
.
styleType
===
"
int
"
)
{
if
(
parseInt
(
view
.
default
)
!==
parseInt
(
value
)){
numberButtonBypass
.
show
();
bypassButton
.
hide
();
me
.
replaceText
(
numberButtonBypass
.
el
.
dom
,
parseInt
(
value
));
me
.
replaceText
(
numberButtonBypass
.
el
.
dom
,
parseInt
(
value
));
}
}
}
if
(
view
.
styleType
===
"
color
"
)
{
if
(
view
.
styleType
===
"
color
"
)
{
if
(
view
.
default
!==
metExploreD3
.
GraphUtils
.
RGBString2Color
(
value
))
{
colorButtonBypass
.
show
();
bypassButton
.
hide
();
if
(
view
.
default
!==
metExploreD3
.
GraphUtils
.
RGBString2Color
(
value
))
{
colorButtonBypass
.
show
();
bypassButton
.
hide
();
colorButtonBypassEl
.
setAttribute
(
"
value
"
,
metExploreD3
.
GraphUtils
.
RGBString2Color
(
value
));
colorButtonBypassEl
.
setAttribute
(
"
value
"
,
metExploreD3
.
GraphUtils
.
RGBString2Color
(
value
));
}
}
}
}
}
else
{
bypassButton
.
show
();
numberButtonBypass
.
hide
();
colorButtonBypass
.
hide
();
bypassButton
.
disable
();
}
}
else
{
bypassButton
.
show
();
...
...
@@ -144,12 +152,6 @@ Ext.define('metExploreViz.view.form.aStyleForm.AStyleFormController', {
bypassButton
.
disable
();
}
}
else
{
bypassButton
.
show
();
numberButtonBypass
.
hide
();
colorButtonBypass
.
hide
();
bypassButton
.
disable
();
}
},
updateContinuousCaption
:
function
(){
...
...
@@ -261,7 +263,8 @@ Ext.define('metExploreViz.view.form.aStyleForm.AStyleFormController', {
if
(
view
.
biologicalType
===
"
link
"
)
styleToUse
=
metExploreD3
.
getLinkStyle
();
view
.
default
=
styleToUse
[
view
.
access
];
if
(
!
view
.
default
)
view
.
default
=
styleToUse
[
view
.
access
];
// WARNING Header render is executed afterrender view
// As a result, render and afterrender can't be used on header
...
...
@@ -335,6 +338,48 @@ Ext.define('metExploreViz.view.form.aStyleForm.AStyleFormController', {
}
},
updateDefaultFormValues
:
function
(){
var
me
=
this
;
var
view
=
me
.
getView
();
var
styleToUse
;
if
(
view
.
biologicalType
===
"
metabolite
"
)
styleToUse
=
metExploreD3
.
getMetaboliteStyle
();
if
(
view
.
biologicalType
===
"
reaction
"
)
styleToUse
=
metExploreD3
.
getReactionStyle
();
if
(
view
.
biologicalType
===
"
link
"
)
styleToUse
=
metExploreD3
.
getLinkStyle
();
// WARNING Header render is executed afterrender view
// As a result, render and afterrender can't be used on header
var
header
=
view
.
down
(
'
header
'
);
if
(
header
)
{
me
.
updateSelectionSet
();
if
(
view
.
styleType
===
"
float
"
||
view
.
styleType
===
"
int
"
)
{
var
numberButton
=
header
.
lookupReference
(
'
numberButton
'
);
numberButton
.
show
();
me
.
replaceText
(
numberButton
.
el
.
dom
,
view
.
default
);
}
if
(
view
.
styleType
===
"
color
"
)
{
var
colorButton
=
header
.
lookupReference
(
'
colorButton
'
);
var
colorButtonEl
=
colorButton
.
el
.
dom
.
querySelector
(
"
#html5colorpicker
"
);
colorButtonEl
.
setAttribute
(
"
value
"
,
view
.
default
);
colorButton
.
show
();
}
}
},
/**
* Define listeners to manage each style
* @param func
...
...
@@ -353,8 +398,8 @@ Ext.define('metExploreViz.view.form.aStyleForm.AStyleFormController', {
if
(
view
.
biologicalType
===
"
link
"
)
styleToUse
=
metExploreD3
.
getLinkStyle
();
view
.
default
=
styleToUse
[
view
.
access
];
if
(
!
view
.
default
)
view
.
default
=
styleToUse
[
view
.
access
];
// WARNING Header render is executed afterrender view
// As a result, render and afterrender can't be used on header
...
...
@@ -592,12 +637,10 @@ Ext.define('metExploreViz.view.form.aStyleForm.AStyleFormController', {
// ValueMapping
getValueMappingsByType
:
function
(
type
){
var
view
=
this
.
getView
();
console
.
log
(
view
);
console
.
log
(
type
);
type
=
type
.
toLowerCase
();
type
=
type
.
replace
(
"
"
,
""
);
console
.
log
(
type
);
switch
(
type
)
{
case
'
asselection
'
:
if
(
!
view
.
valueAsSelectionMappings
)
view
.
valueAsSelectionMappings
=
[];
...
...
@@ -623,7 +666,6 @@ Ext.define('metExploreViz.view.form.aStyleForm.AStyleFormController', {
},
getValueMappingsSet
:
function
(
type
){
var
valueMappings
=
this
.
getValueMappingsByType
(
type
);
console
.
log
(
valueMappings
);
return
valueMappings
;
},
getValueMappingById
:
function
(
type
,
id
){
...
...
app/view/form/allStylesByTypeForm/AllStylesByTypeFormController.js
View file @
96e08e43
...
...
@@ -48,7 +48,6 @@ Ext.define('metExploreViz.view.form.allStylesByTypeForm.AllStylesByTypeFormContr
var
view
=
me
.
getView
();
if
(
view
)
{
console
.
log
(
view
.
lookupReference
(
"
caption
"
));
var
parentElement
=
view
.
lookupReference
(
"
caption
"
).
el
.
dom
;
// Obtenir une référence au premier enfant
var
theFirstChild
=
parentElement
.
firstChild
;
...
...
@@ -90,8 +89,6 @@ Ext.define('metExploreViz.view.form.allStylesByTypeForm.AllStylesByTypeFormContr
.
attr
(
"
transform
"
,
"
translate(106, 22) rotate(-35)
"
)
.
style
(
"
text-anchor
"
,
"
middle
"
)
.
style
(
"
fill
"
,
"
#ffffff
"
);
console
.
log
(
me
);
console
.
log
(
view
);
}
},
updateForm
:
function
(){
...
...
app/view/form/allStylesForm/AllStylesFormController.js
View file @
96e08e43
...
...
@@ -75,14 +75,14 @@ Ext.define('metExploreViz.view.form.allStylesForm.AllStylesFormController', {
allScales
.
forEach
(
function
(
scale
)
{
var
form
=
Ext
.
getCmp
(
scale
.
biologicalType
+
"
StyleForm
"
);
if
(
form
){
console
.
log
(
form
);
var
theStyleForm
=
form
.
query
(
"
aStyleForm
"
).
find
(
function
(
aStyleForm
)
{
return
aStyleForm
.
title
===
scale
.
title
;});
if
(
theStyleForm
){
console
.
log
(
theStyleForm
);
if
(
scale
.
default
){
if
(
scale
.
default
!==
theStyleForm
.
default
){
theStyleForm
.
default
=
scale
.
default
;
theStyleForm
.
getController
().
updateDefaultFormValues
();
metExploreD3
.
GraphStyleEdition
.
setCollectionStyle
(
theStyleForm
.
target
,
theStyleForm
.
attrType
,
theStyleForm
.
attrName
,
theStyleForm
.
biologicalType
,
scale
.
default
);
}
}
...
...
app/view/form/continuousNumberMappingEditor/ContinuousNumberMappingEditorController.js
View file @
96e08e43
...
...
@@ -22,8 +22,6 @@ Ext.define('metExploreViz.view.form.continuousNumberMappingEditor.ContinuousNumb
view
.
on
({
afterrender
:
function
(
that
){
console
.
log
(
view
);
console
.
log
(
view
.
aStyleFormParent
);
var
width
=
450
;
var
height
=
85
;
...
...
app/view/form/selectComponent/SelectComponentController.js
View file @
96e08e43
...
...
@@ -53,8 +53,6 @@ Ext.define('metExploreViz.view.form.selectComponent.SelectComponentController',
initCaption
:
function
(
componentJSON
){
console
.
log
(
componentJSON
);
var
comboComponent
=
Ext
.
getCmp
(
'
selectComponentVisu
'
);
var
store
=
comboComponent
.
getStore
();
...
...
app/view/form/selectConditionForm/SelectConditionFormController.js
View file @
96e08e43
...
...
@@ -457,7 +457,8 @@ Ext.define('metExploreViz.view.form.selectConditionForm.SelectConditionFormContr
if
(
aStyleFormParent
.
biologicalType
===
"
link
"
)
styleToUse
=
metExploreD3
.
getLinkStyle
();
aStyleFormParent
.
default
=
styleToUse
[
aStyleFormParent
.
access
];
if
(
!
aStyleFormParent
.
default
)
aStyleFormParent
.
default
=
styleToUse
[
aStyleFormParent
.
access
];
metExploreD3
.
GraphStyleEdition
.
removeMappedClassStyle
(
aStyleFormParent
.
target
,
aStyleFormParent
.
attrType
,
aStyleFormParent
.
attrName
,
aStyleFormParent
.
biologicalType
,
aStyleFormParent
.
default
);
metExploreD3
.
GraphStyleEdition
.
setCollectionStyle
(
aStyleFormParent
.
target
,
aStyleFormParent
.
attrType
,
aStyleFormParent
.
attrName
,
aStyleFormParent
.
biologicalType
,
aStyleFormParent
.
default
);
...
...
@@ -603,8 +604,6 @@ Ext.define('metExploreViz.view.form.selectConditionForm.SelectConditionFormContr
if
(
captions
&&
type
===
"
discrete
"
)
{
console
.
log
(
captions
);
if
(
Ext
.
getCmp
(
'
panel
'
+
cond
)
===
undefined
||
type
===
"
suggestion
"
)
{
...
...
@@ -742,7 +741,6 @@ Ext.define('metExploreViz.view.form.selectConditionForm.SelectConditionFormContr
afterrender
:
function
()
{
var
colorButtonMappingEl
=
newMappingCaptionForm
.
el
.
dom
.
querySelector
(
"
#html5colorpicker
"
);
console
.
log
();
colorButtonMappingEl
.
addEventListener
(
"
change
"
,
function
(
evt
)
{
var
newColor
=
evt
.
target
.
value
;
...
...
@@ -920,7 +918,6 @@ Ext.define('metExploreViz.view.form.selectConditionForm.SelectConditionFormContr
}
if
(
scaleCaption
&&
type
===
"
continuous
"
){
console
.
log
(
aStyleFormParent
);
if
(
aStyleFormParent
.
styleType
===
"
color
"
)
{
me
.
drawContinuousScaleCaption
();
}
...
...
app/view/menu/viz_ConvexHullMenu/Viz_ConvexHullMenuController.js
View file @
96e08e43
...
...
@@ -142,7 +142,6 @@ Ext.define('metExploreViz.view.menu.viz_ConvexHullMenu.Viz_ConvexHullMenuControl
},
highlightComponents
:
function
(
component
){
console
.
log
(
component
);
var
me
=
this
,
viewModel
=
me
.
getViewModel
(),
view
=
me
.
getView
();
...
...
resources/lib/functions/GraphNetwork.js
View file @
96e08e43
...
...
@@ -442,7 +442,6 @@ metExploreD3.GraphNetwork = {
})
.
on
(
"
end
"
,
function
()
{
var
scrollable
=
metExploreD3
.
GraphNetwork
.
scrollable
;
console
.
log
(
scrollable
);
if
(
scrollable
===
false
){
...
...
resources/lib/functions/GraphPanel.js
View file @
96e08e43
...
...
@@ -775,12 +775,12 @@ metExploreD3.GraphPanel = {
networkVizSession
.
setD3Data
(
networkData
);
if
(
sessions
[
key
].
selectedNodes
)
{
sessions
[
key
].
selectedNodes
.
forEach
(
function
(
nodeId
){
networkVizSession
.
addSelectedNode
(
nodeId
);
});
}
//
if(sessions[key].selectedNodes)
//
{
//
sessions[key].selectedNodes.forEach(function(nodeId){
//
networkVizSession.addSelectedNode(nodeId);
//
});
//
}
if
(
sessions
[
key
].
duplicatedNodes
)
{
...
...
resources/lib/functions/GraphStyleEdition.js
View file @
96e08e43
...
...
@@ -539,8 +539,6 @@ metExploreD3.GraphStyleEdition = {
if
(
biologicalType
===
"
link
"
)
selection
=
d3
.
select
(
"
#viz
"
).
select
(
"
#D3viz
"
).
selectAll
(
"
.linkGroup
"
);
console
.
log
(
selection
);
console
.
log
(
target
+
"
:not(.bypassed
"
+
attrType
+
attrName
+
biologicalType
+
"
)
"
);
selection
.
selectAll
(
target
+
"
:not(.bypassed
"
+
attrType
+
attrName
+
biologicalType
+
"
)
"
+
"
:not(.mapped
"
+
attrType
+
attrName
+
biologicalType
+
"
)
"
)[
attrType
](
attrName
,
value
);
});
},
...
...
resources/lib/functions/GraphUtils.js
View file @
96e08e43
...
...
@@ -1667,7 +1667,6 @@ clone.setAttribute("version", "1.1");
metExploreD3
.
deferFunction
(
function
()
{
console
.
log
(
scaleRange
);
//
// var networkJSON ="{";
// var session = _metExploreViz.getSessionById('viz');
...
...
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