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metexplore
MetExploreViz
Commits
15624210
Commit
15624210
authored
Mar 24, 2020
by
maxchaza
Browse files
Merge branch 'hotfix/jsduckForFunction'
parents
7b18c3de
d99750d2
Changes
6
Hide whitespace changes
Inline
Side-by-side
app.json
View file @
15624210
...
...
@@ -7,7 +7,7 @@
/**
*
The
version
of
the
application.
*/
"version"
:
"3.0.1
4
"
,
"version"
:
"3.0.1
5
"
,
/**
*
The
relative
path
to
the
application's
markup
file
(html
,
jsp
,
asp
,
etc.).
...
...
categories.json
0 → 100644
View file @
15624210
[
{
"name"
:
"MetExplore"
,
"groups"
:[
{
"name"
:
"Model"
,
"classes"
:[
"ColorComponent"
,
"ComparedPanel"
,
"Compartment"
,
"GeneralStyle"
,
"LinkData"
,
"LinkStyle"
,
"Mapping"
,
"MappingData"
,
"MetaboliteStyle"
,
"NetworkData"
,
"NetworkVizSession"
,
"NodeData"
,
"Pathway"
,
"ReactionStyle"
,
"Scale"
,
"ValueMapping"
]
},{
"name"
:
"metExploreD3"
,
"classes"
:[
"metExploreD3.*"
]
},{
"name"
:
"metExploreViz"
,
"classes"
:[
"metExploreViz.*"
]
}
]
}
]
\ No newline at end of file
doc-conf.json
0 → 100644
View file @
15624210
{
"--"
:
"./"
,
"--warnings"
:
[
"all:ext/src"
],
"--ignore-html"
:
[
"locale"
,
"debug"
],
"--categories"
:
"categories.json"
,
"--output"
:
"docs"
,
"--exclude"
:
"app.json,bootstrap.css,bootstrap.json,bootstrap.jsonp,build.xml,karma.conf.js,build/,docs/,ext/,licenses/,sass/,scripts/,src/,test/,resources/css/,resources/ext/,resources/font-awesome/,resources/font-ext/,resources/fonts/,resources/icons/,resources/images/,resources/css/,resources/lib/d3.js/,resources/lib/graphjs/,resources/lib/jquery/,resources/lib/jquery-3.0.0.min.js,resources/lib/dagre.js,app.js"
}
resources/lib/functions/D3Extention.js
View file @
15624210
...
...
@@ -2,7 +2,6 @@
* @author MC
* Functions to extend d3js selection function
*/
d3
.
selection
.
prototype
.
attrEditor
=
function
(
attr
,
val
)
{
var
selection
=
this
;
...
...
resources/lib/functions/GraphStyleEdition.js
View file @
15624210
...
...
@@ -960,16 +960,16 @@ metExploreD3.GraphStyleEdition = {
arrBypass
.
push
(
d3
.
select
(
this
)[
attrType
](
attrName
));
});
valuesBypassed
=
[...
new
Set
(
arrBypass
)
]
;
valuesBypassed
=
Array
.
from
(
new
Set
(
arrBypass
)
)
;
selection
.
selectAll
(
target
+
"
:not(.bypassed
"
+
attrType
+
attrName
+
biologicalType
+
"
)
"
)
.
each
(
function
(){
arr
.
push
(
d3
.
select
(
this
)[
attrType
](
attrName
));
});
values
=
[...
new
Set
(
arr
)
]
;
values
=
Array
.
from
(
new
Set
(
arr
)
)
;
union
=
[...
new
Set
(
valuesBypassed
.
concat
(
values
))
]
;
union
=
Array
.
from
(
new
Set
(
valuesBypassed
.
concat
(
values
))
)
;
});
if
(
valuesBypassed
.
length
>
0
&&
...
...
resources/lib/functions/GraphUtils.js
View file @
15624210
...
...
@@ -2,11 +2,6 @@
* @author MC
* (a)description : Basic functions
*/
String
.
prototype
.
isEmpty
=
function
()
{
return
(
!
this
.
trim
());
};
metExploreD3
.
GraphUtils
=
{
decodeJSON
:
function
(
json
){
try
{
...
...
@@ -1936,3 +1931,6 @@ clone.setAttribute("version", "1.1");
}
};
String
.
prototype
.
isEmpty
=
function
()
{
return
(
!
this
.
trim
());
};
\ No newline at end of file
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