fichiers rnd et html f3w

202110_BALBc/Pool_cohortes/report_pool cohortes.Rmd

@@ -2503,7 +2503,7 @@ table(get_variable(data, "Group"))
 Puis on ne conserve que les taxas prévalents
 
 ```{r 14-prevalent-taxa, eval=TRUE}
-prevalent_taxa <- genefilter_sample(data, is_present, A = (3)) #25% des echantillons
+prevalent_taxa <- genefilter_sample(data, is_present, A = 6) #25% des echantillons
 filtered.data <- prune_taxa(prevalent_taxa, data)
 ```
 
@@ -3548,7 +3548,7 @@ plot_da_compositebis(da.otus, data, labvec = c("A_Caec" = "A", "AG_Caec" = "AG")
 
 ```
 
-```{r  session info,eval = TRUE}
+```{r  session info,eval = TRUE, echo = TRUE}
 #conflicts(detail=TRUE)
 sessionInfo()
 ```