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inter_CATI_omics
Hackathon_octobre2021
atelier_repro
Commits
0d45aa98
Commit
0d45aa98
authored
Oct 08, 2021
by
Ludovic Legrand
Browse files
ajout des variables groovy
parent
169fecc5
Changes
1
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Nextflow/02process/process.simple.nf
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0d45aa98
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@@ -13,17 +13,20 @@ process gunzip {
path('*.fastq', emit: outfile)
script:
// ici du groovy
// ici du groovy
println("groovy: " + id)
toto = "titi"
"""
# ici ce qui me plait, par défaut du bash
#!/usr/bin/env bash
gzip -kcd ${reads[0]} > ${id}.R1.fastq
touch myfile
echo $i{toto}
"""
}
workflow {
gunzip(chanFastq)
//gunzip.out[0].view()
gunzip.out.outfile.view()
}
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