Commit e6712d87 authored by Celine Noirot's avatar Celine Noirot
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Add .gitlab-ci.yml

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# recipe for building singularity image and deploy it on the registery for bwa version 0.7.17
image:
name: quay.io/singularity/singularity:v3.4.0
entrypoint: [""]
stages:
- build
- deploy
# Build Singularity container bwa_v0.7.17.sif
singularity-image:
stage: build
script:
- singularity build template.sif Singularity.def
artifacts:
paths:
- template.sif
# Push the image template.sif on the registry
deploy:
stage: deploy
script:
- singularity push --docker-username "${CI_REGISTRY_USER}" --docker-password "${CI_REGISTRY_PASSWORD}" template.sif oras://"$CI_REGISTRY_IMAGE"/"$CI_PROJECT_NAME":"$CI_COMMIT_TAG"
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