1. 11 Jan, 2018 8 commits
  2. 10 Jan, 2018 3 commits
  3. 20 Jun, 2016 2 commits
  4. 07 Jun, 2016 1 commit
    • rongaro rongaro's avatar
      updated: · 051f8c16
      rongaro rongaro authored
        - clean interaction obj
        - rna feature length functions
        - ssearch parser modified
        - interaction 'define_start_stop' method move into 'add_energy' since it is used by all wf
        
      added:
        - GFF3 gap attribute parser
        - GFF3 converter <-> interaction/rna feature
      
      resolved:
        - wrong sequence extracted
      051f8c16
  5. 23 May, 2016 1 commit
    • rongaro rongaro's avatar
      updated: · f436572a
      rongaro rongaro authored
       - delete project method can now delete multiple projects at once
       - filters for datatable: only regions which are in dataset
       - forna/project/result pages 
       - workflow/forna/project/result js with revealing module pattern
       - datatable v1.10 -> v1.10.12 to add 'buttons' plugin
       
      added:
       - datatable plugin 'buttons' to add buttons for export CSV/Print and custom (collapsible for filters)
      f436572a
  6. 18 May, 2016 2 commits
    • rongaro rongaro's avatar
      Last commit was made too quickly, here are some comments... · 506387e5
      rongaro rongaro authored
      updated:
       - ui: datatable filters and url addressing
       - datatable controller algo
       - ui: datatable row grouping disabled
       - bio_lambda to bio_helper (lambda replace by fast functions)
       
      added:
       - python builtin version/informations in each file
       - exceptions core
       - authkey in core with specific objects
       - mrna and ncrna core objects fusion in rna_feature
       - ui: forna, information of interaction
       - gff3_feature_manager: gff3 list of records manager and explorer
      
      resolved:
       - ui: workspace screen when a file in wf is missing
       
      in progress:
       - read and build a gff3 prediction file in load wf to create the exact same project
      506387e5
    • rongaro rongaro's avatar
      No commit message · d805a47a
      rongaro rongaro authored
      No commit message
      d805a47a
  7. 05 Apr, 2016 3 commits
  8. 04 Apr, 2016 2 commits
    • rongaro rongaro's avatar
      updated: · d2366593
      rongaro rongaro authored
        - workflow form interaction
        - remove applet static dir
      d2366593
    • rongaro rongaro's avatar
      updated: · e6cfbf64
      rongaro rongaro authored
        - workflow output filters server side
        - clean projects option
        - web form for workflows
        
      added:
        - indexprediction component
        - example form interaction (with sample)
        
      resolved:
        - see user workspace when some projects are referenced in user data but the workflow does not exist anymore
        
        
      e6cfbf64
  9. 31 Mar, 2016 1 commit
  10. 30 Mar, 2016 1 commit
    • rongaro rongaro's avatar
      updated: · d403b1cd
      rongaro rongaro authored
        - cleaner code
        - all authkeys interactions (templates/js/server/classes)
        - ssearch parser
        - user doc
      
      added: 
        - authkey management
        - component "index_predictions"
      d403b1cd
  11. 18 Mar, 2016 2 commits
  12. 17 Mar, 2016 1 commit
    • rongaro rongaro's avatar
      added: · 0d043bf6
      rongaro rongaro authored
        - 'check' option in CLI, v1.0.0
        
      update: 
        - 'clean-projects' CLI option renamed 'clean'
        - doc admin/ok, users/in progress
        - ssearch36 output parser rewritten 
        
      0d043bf6
  13. 16 Mar, 2016 1 commit
  14. 10 Mar, 2016 2 commits
  15. 09 Mar, 2016 3 commits
  16. 08 Mar, 2016 6 commits
  17. 07 Mar, 2016 1 commit
    • rongaro rongaro's avatar
      Added: · a227a6a8
      rongaro rongaro authored
        - UI: workflow description below title
        - UI: same menu dropdown for all workflows
        - workflow errors files for some components
      
      Update: 
        - workflows template, simplified 
        - "add_energy" algo
        - better workflow description
        - predictors valid/tested versions:
          - ssearch: >= v36.3.6
          - risearch: == v1.1
          - viennarna: >= v2.2.0
          - intarna: ==1.2.5
      a227a6a8