ng6 merge requestshttps://forgemia.inra.fr/genotoul-bioinfo/ng6/-/merge_requests2020-02-17T15:07:58+01:00https://forgemia.inra.fr/genotoul-bioinfo/ng6/-/merge_requests/101Merge branch Dev with Master2020-02-17T15:07:58+01:00Romain ThervilleMerge branch Dev with MasterMerge to create the tag V3.2.7.
More information on the commits and changes in the corresponding tag.Merge to create the tag V3.2.7.
More information on the commits and changes in the corresponding tag.V3.2.7Romain ThervilleRomain Thervillehttps://forgemia.inra.fr/genotoul-bioinfo/ng6/-/merge_requests/102Merge branch issue#172 with dev2020-02-26T13:57:43+01:00Romain ThervilleMerge branch issue#172 with devUpdate to the workflow addproject
The "project space" field in the form has been made a select field, with
options build dynamically.
issue #172Update to the workflow addproject
The "project space" field in the form has been made a select field, with
options build dynamically.
issue #172V3.2.7Celine NoirotCeline Noirothttps://forgemia.inra.fr/genotoul-bioinfo/ng6/-/merge_requests/103Merge branch issue#138 with dev2020-03-18T18:06:18+01:00Romain ThervilleMerge branch issue#138 with devUpdate to the run table properties
The date sorting has been fixed, the column type was set to "date"
instead of "date-eu".
Issue #138Update to the run table properties
The date sorting has been fixed, the column type was set to "date"
instead of "date-eu".
Issue #138V3.2.8Celine NoirotCeline Noirothttps://forgemia.inra.fr/genotoul-bioinfo/ng6/-/merge_requests/104Migration issues2020-04-03T15:08:46+02:00Celine NoirotMigration issuesCorrect issues #171 #175Correct issues #171 #175V3.2.7Romain ThervilleRomain Thervillehttps://forgemia.inra.fr/genotoul-bioinfo/ng6/-/merge_requests/105Merge branch Master with dev2020-04-03T15:14:34+02:00Romain ThervilleMerge branch Master with devApplies the last commits to the dev branch.
Correct issues #171 #175Applies the last commits to the dev branch.
Correct issues #171 #175V3.2.7Romain ThervilleRomain Thervillehttps://forgemia.inra.fr/genotoul-bioinfo/ng6/-/merge_requests/106Merge branch issue#129 with dev2020-06-04T10:20:45+02:00Romain ThervilleMerge branch issue#129 with devThe switchspaceid workflow has been made to update the paths to the migrated analysis files (broken links and missing files).
Issue#129The switchspaceid workflow has been made to update the paths to the migrated analysis files (broken links and missing files).
Issue#129Celine NoirotCeline Noirothttps://forgemia.inra.fr/genotoul-bioinfo/ng6/-/merge_requests/107Merge branch Dev with master2020-06-04T14:42:04+02:00Romain ThervilleMerge branch Dev with masterFix for the issue #129.Fix for the issue #129.V3.2.7.2Romain ThervilleRomain Thervillehttps://forgemia.inra.fr/genotoul-bioinfo/ng6/-/merge_requests/108Merge branch Issue#190 with master2020-11-12T11:50:15+01:00Romain ThervilleMerge branch Issue#190 with masterUpdate to the purge process.
See issue #190 for more infos.Update to the purge process.
See issue #190 for more infos.V3.2.7.5Romain ThervilleRomain Thervillehttps://forgemia.inra.fr/genotoul-bioinfo/ng6/-/merge_requests/109Merge branch Issue#190 with master2020-11-12T16:13:25+01:00Romain ThervilleMerge branch Issue#190 with masterUpdate to the purge process.
See the issue #190 for more infos.Update to the purge process.
See the issue #190 for more infos.V3.2.7.5Celine NoirotCeline Noirothttps://forgemia.inra.fr/genotoul-bioinfo/ng6/-/merge_requests/110Merge branch Dev with master2020-11-12T16:26:03+01:00Romain ThervilleMerge branch Dev with master- update to the analysis class (issue #129)
- update to the purge process to exclude log files (issue #190)- update to the analysis class (issue #129)
- update to the purge process to exclude log files (issue #190)V3.2.7.5Romain ThervilleRomain Thervillehttps://forgemia.inra.fr/genotoul-bioinfo/ng6/-/merge_requests/111Update to the analysis.py class2020-11-24T10:31:03+01:00Romain ThervilleUpdate to the analysis.py classNew get_directory() function for the analysis.py class.
(There was an AttributeError: 'Run_stats' object has no attribute 'get_web_filepath' error. )
issue #129New get_directory() function for the analysis.py class.
(There was an AttributeError: 'Run_stats' object has no attribute 'get_web_filepath' error. )
issue #129V3.2.7.5Romain ThervilleRomain Thervillehttps://forgemia.inra.fr/genotoul-bioinfo/ng6/-/merge_requests/112#191 Correcting the issue on ont_qc2021-02-15T10:45:26+01:00Audrey Gibert#191 Correcting the issue on ont_qcCorrection of an issue occuring when more than 8 samples are multiplexed on ONT technology. Small code changing but big result to come!Correction of an issue occuring when more than 8 samples are multiplexed on ONT technology. Small code changing but big result to come!V3.2.8Romain ThervilleRomain Thervillehttps://forgemia.inra.fr/genotoul-bioinfo/ng6/-/merge_requests/113Merge branch Issue#192 with master2021-02-15T10:48:43+01:00Romain ThervilleMerge branch Issue#192 with masterNew logs added to the purge process, related to the issue #192.New logs added to the purge process, related to the issue #192.V3.2.8Romain ThervilleRomain Thervillehttps://forgemia.inra.fr/genotoul-bioinfo/ng6/-/merge_requests/114Merge branch Issue#189 with master2021-02-24T13:33:51+01:00Romain ThervilleMerge branch Issue#189 with masterResolves the issue #189.Resolves the issue #189.V3.2.8Romain ThervilleRomain Thervillehttps://forgemia.inra.fr/genotoul-bioinfo/ng6/-/merge_requests/115Merge branch issue#195 with master2021-03-19T17:04:11+01:00Romain ThervilleMerge branch issue#195 with masterUpdate to the purge process
- Fix for the multiple "esitoul@inrae.fr" adresses in the cc mail field.
issue #195Update to the purge process
- Fix for the multiple "esitoul@inrae.fr" adresses in the cc mail field.
issue #195V3.2.8Romain ThervilleRomain Thervillehttps://forgemia.inra.fr/genotoul-bioinfo/ng6/-/merge_requests/116Merge branch Issue#192 with master2021-03-19T17:05:21+01:00Romain ThervilleMerge branch Issue#192 with masterUpdate to the purge process and Database
- New trigger to prevent the insertion of a second purge demand for a
single project
- New mail model to warn administrators about the "double demand".
- Reworks for the send_purge_demand_mail() ...Update to the purge process and Database
- New trigger to prevent the insertion of a second purge demand for a
single project
- New mail model to warn administrators about the "double demand".
- Reworks for the send_purge_demand_mail() and add_purge_demand()
functions, of course.
Issue #192V3.2.8Romain ThervilleRomain Thervillehttps://forgemia.inra.fr/genotoul-bioinfo/ng6/-/merge_requests/117Merge branch Issue#193 with master2021-03-22T17:06:07+01:00Romain ThervilleMerge branch Issue#193 with masterHidden runs and analyzes are still included in the purge process, but do not appear in the alert mails anymore (Not in the lists, not in the computed sizes).
Issue #193Hidden runs and analyzes are still included in the purge process, but do not appear in the alert mails anymore (Not in the lists, not in the computed sizes).
Issue #193V3.2.8Romain ThervilleRomain Thervillehttps://forgemia.inra.fr/genotoul-bioinfo/ng6/-/merge_requests/118Merge branch Dev with Master2021-03-25T10:51:01+01:00Romain ThervilleMerge branch Dev with MasterMassive update to the purge process
- The multiple "esitoul" email adresses in the purge mail's "cc" field have been fixed. Issue #195
- The hidden runs and analyzes will not appear anymore in the purge mail (and resent purge mail), no...Massive update to the purge process
- The multiple "esitoul" email adresses in the purge mail's "cc" field have been fixed. Issue #195
- The hidden runs and analyzes will not appear anymore in the purge mail (and resent purge mail), nor in the volume counts for each purge demand, but are still recorded in our database. Issues #193, #178
- If a purge demand is already declared for a project (and still pending), and an admin tries to open a new one, a SQL trigger is called to prevent the insertion. This results in a mail sent to the nG6 admins, informing them that no new demand can be openned (for this project) as long as the old one has not been treated. Issue #192V3.2.8Romain ThervilleRomain Thervillehttps://forgemia.inra.fr/genotoul-bioinfo/ng6/-/merge_requests/119#182 adding links to faq2021-04-06T14:21:42+02:00Audrey Gibert#182 adding links to faqThis branch brings some code to add information frames to the users :
* how to add a user when they are on the project page with a link to FAQ
* how to download data easily with link to FAQ and Download pageThis branch brings some code to add information frames to the users :
* how to add a user when they are on the project page with a link to FAQ
* how to download data easily with link to FAQ and Download pageV3.2.8Romain ThervilleRomain Thervillehttps://forgemia.inra.fr/genotoul-bioinfo/ng6/-/merge_requests/120Merge branch Issue#196 with master2021-05-04T12:08:59+02:00Romain ThervilleMerge branch Issue#196 with masterUpdate to every php mail() function
A -f option has been implemented with the value "ng6-support@inrae.fr".
Issue #196Update to every php mail() function
A -f option has been implemented with the value "ng6-support@inrae.fr".
Issue #196V3.2.8Gerald Salingerald.salin@inra.frGerald Salingerald.salin@inra.fr