ng6 merge requestshttps://forgemia.inra.fr/genotoul-bioinfo/ng6/-/merge_requests2022-04-26T13:46:36+02:00https://forgemia.inra.fr/genotoul-bioinfo/ng6/-/merge_requests/135Removing the size display from the project and run pages2022-04-26T13:46:36+02:00Romain ThervilleRemoving the size display from the project and run pagesUpdate to the project and run pages
- This size computing and displaying has been removed from those pages.
Issue #224Update to the project and run pages
- This size computing and displaying has been removed from those pages.
Issue #224V3.3https://forgemia.inra.fr/genotoul-bioinfo/ng6/-/merge_requests/134Modification of BWA algo #2212022-02-14T09:43:27+01:00Jules SabbanModification of BWA algo #221Change BWA algo `aln` to `mem`.Change BWA algo `aln` to `mem`.Jules SabbanJules Sabbanhttps://forgemia.inra.fr/genotoul-bioinfo/ng6/-/merge_requests/133Merge branch issue#218 with master2022-01-07T10:51:49+01:00Romain ThervilleMerge branch issue#218 with masterUpdate to AnalysisTemplate.tpl
In the "download" analysis tab, the .png files are not excluded from the
list anymore.
Issue #218Update to AnalysisTemplate.tpl
In the "download" analysis tab, the .png files are not excluded from the
list anymore.
Issue #218https://forgemia.inra.fr/genotoul-bioinfo/ng6/-/merge_requests/132Merge branch issue#216 with master2021-12-06T18:06:38+01:00Romain ThervilleMerge branch issue#216 with masterUpdate to nG6_utils.php
The path to application.properties has been fixed
Issue #216Update to nG6_utils.php
The path to application.properties has been fixed
Issue #216https://forgemia.inra.fr/genotoul-bioinfo/ng6/-/merge_requests/131Merge branch issue#217 with master2021-12-06T18:07:11+01:00Romain ThervilleMerge branch issue#217 with masterUpdate to class.tx_nG6_pi6_purge.php
on line 173, the purge_delay param had 2 $.
Issue #217Update to class.tx_nG6_pi6_purge.php
on line 173, the purge_delay param had 2 $.
Issue #217https://forgemia.inra.fr/genotoul-bioinfo/ng6/-/merge_requests/130update require and use for tx_nG6_db and utils2021-10-12T04:27:11+02:00Gerald Salingerald.salin@inra.frupdate require and use for tx_nG6_db and utilsV3.3Gerald Salingerald.salin@inra.frGerald Salingerald.salin@inra.frhttps://forgemia.inra.fr/genotoul-bioinfo/ng6/-/merge_requests/129Typo3v102021-10-11T18:44:27+02:00Gerald Salingerald.salin@inra.frTypo3v10V3.3Gerald Salingerald.salin@inra.frGerald Salingerald.salin@inra.frhttps://forgemia.inra.fr/genotoul-bioinfo/ng6/-/merge_requests/128Merge branch issue#210 and master2021-06-03T18:21:02+02:00Romain ThervilleMerge branch issue#210 and masterUpdate to class.tx_nG6_eid.php
The ssh user test has been fixed (there was a permission error).
Issue #210Update to class.tx_nG6_eid.php
The ssh user test has been fixed (there was a permission error).
Issue #210V3.3Romain ThervilleRomain Thervillehttps://forgemia.inra.fr/genotoul-bioinfo/ng6/-/merge_requests/126Merge branch Issue#205 with master2021-05-06T11:35:37+02:00Romain ThervilleMerge branch Issue#205 with masterUpdate to utils.php
The path to the PasswordHashFactory class has been updated with the new
typo3 version. This commit fixes the hash_password() function.
Issue#205Update to utils.php
The path to the PasswordHashFactory class has been updated with the new
typo3 version. This commit fixes the hash_password() function.
Issue#205V3.3https://forgemia.inra.fr/genotoul-bioinfo/ng6/-/merge_requests/125Update quickstart.html2021-05-04T12:08:23+02:00Audrey GibertUpdate quickstart.htmlGerald Salingerald.salin@inra.frGerald Salingerald.salin@inra.frhttps://forgemia.inra.fr/genotoul-bioinfo/ng6/-/merge_requests/124Update index.html2021-05-04T12:08:09+02:00Audrey GibertUpdate index.htmlGerald Salingerald.salin@inra.frGerald Salingerald.salin@inra.frhttps://forgemia.inra.fr/genotoul-bioinfo/ng6/-/merge_requests/123Typo3 v92021-05-04T11:47:31+02:00Gerald Salingerald.salin@inra.frTypo3 v9V3.2.8.1Gerald Salingerald.salin@inra.frGerald Salingerald.salin@inra.frhttps://forgemia.inra.fr/genotoul-bioinfo/ng6/-/merge_requests/122Typo3 v92021-04-28T00:37:47+02:00Gerald Salingerald.salin@inra.frTypo3 v9Compatibility with typo3 V9
add envelop sender adress to get error on email sendingCompatibility with typo3 V9
add envelop sender adress to get error on email sendingV3.2.8Gerald Salingerald.salin@inra.frGerald Salingerald.salin@inra.frhttps://forgemia.inra.fr/genotoul-bioinfo/ng6/-/merge_requests/121conformity to typo3 V9.52021-04-23T11:47:56+02:00Gerald Salingerald.salin@inra.frconformity to typo3 V9.5V3.2.8.1Gerald Salingerald.salin@inra.frGerald Salingerald.salin@inra.frhttps://forgemia.inra.fr/genotoul-bioinfo/ng6/-/merge_requests/119#182 adding links to faq2021-04-06T14:21:42+02:00Audrey Gibert#182 adding links to faqThis branch brings some code to add information frames to the users :
* how to add a user when they are on the project page with a link to FAQ
* how to download data easily with link to FAQ and Download pageThis branch brings some code to add information frames to the users :
* how to add a user when they are on the project page with a link to FAQ
* how to download data easily with link to FAQ and Download pageV3.2.8Romain ThervilleRomain Thervillehttps://forgemia.inra.fr/genotoul-bioinfo/ng6/-/merge_requests/118Merge branch Dev with Master2021-03-25T10:51:01+01:00Romain ThervilleMerge branch Dev with MasterMassive update to the purge process
- The multiple "esitoul" email adresses in the purge mail's "cc" field have been fixed. Issue #195
- The hidden runs and analyzes will not appear anymore in the purge mail (and resent purge mail), no...Massive update to the purge process
- The multiple "esitoul" email adresses in the purge mail's "cc" field have been fixed. Issue #195
- The hidden runs and analyzes will not appear anymore in the purge mail (and resent purge mail), nor in the volume counts for each purge demand, but are still recorded in our database. Issues #193, #178
- If a purge demand is already declared for a project (and still pending), and an admin tries to open a new one, a SQL trigger is called to prevent the insertion. This results in a mail sent to the nG6 admins, informing them that no new demand can be openned (for this project) as long as the old one has not been treated. Issue #192V3.2.8Romain ThervilleRomain Thervillehttps://forgemia.inra.fr/genotoul-bioinfo/ng6/-/merge_requests/116Merge branch Issue#192 with master2021-03-19T17:05:21+01:00Romain ThervilleMerge branch Issue#192 with masterUpdate to the purge process and Database
- New trigger to prevent the insertion of a second purge demand for a
single project
- New mail model to warn administrators about the "double demand".
- Reworks for the send_purge_demand_mail() ...Update to the purge process and Database
- New trigger to prevent the insertion of a second purge demand for a
single project
- New mail model to warn administrators about the "double demand".
- Reworks for the send_purge_demand_mail() and add_purge_demand()
functions, of course.
Issue #192V3.2.8Romain ThervilleRomain Thervillehttps://forgemia.inra.fr/genotoul-bioinfo/ng6/-/merge_requests/115Merge branch issue#195 with master2021-03-19T17:04:11+01:00Romain ThervilleMerge branch issue#195 with masterUpdate to the purge process
- Fix for the multiple "esitoul@inrae.fr" adresses in the cc mail field.
issue #195Update to the purge process
- Fix for the multiple "esitoul@inrae.fr" adresses in the cc mail field.
issue #195V3.2.8Romain ThervilleRomain Thervillehttps://forgemia.inra.fr/genotoul-bioinfo/ng6/-/merge_requests/114Merge branch Issue#189 with master2021-02-24T13:33:51+01:00Romain ThervilleMerge branch Issue#189 with masterResolves the issue #189.Resolves the issue #189.V3.2.8Romain ThervilleRomain Thervillehttps://forgemia.inra.fr/genotoul-bioinfo/ng6/-/merge_requests/113Merge branch Issue#192 with master2021-02-15T10:48:43+01:00Romain ThervilleMerge branch Issue#192 with masterNew logs added to the purge process, related to the issue #192.New logs added to the purge process, related to the issue #192.V3.2.8Romain ThervilleRomain Therville