ng6 merge requestshttps://forgemia.inra.fr/genotoul-bioinfo/ng6/-/merge_requests2018-07-18T15:48:10+02:00https://forgemia.inra.fr/genotoul-bioinfo/ng6/-/merge_requests/4Dev purge2018-07-18T15:48:10+02:00Claire KuchlyDev purgeFinal developpement for purge administration.Final developpement for purge administration.V3.1 - PurgeClaire KuchlyClaire Kuchlyhttps://forgemia.inra.fr/genotoul-bioinfo/ng6/-/merge_requests/5Ng6 software updates2018-08-02T13:14:22+02:00Maxime MannoNg6 software updatesV3.2 - SlurmMaxime MannoMaxime Mannohttps://forgemia.inra.fr/genotoul-bioinfo/ng6/-/merge_requests/13#962018-12-20T18:25:43+01:00Roxane Boyer#96Roxane BoyerRoxane Boyerhttps://forgemia.inra.fr/genotoul-bioinfo/ng6/-/merge_requests/21N g6 ont qc bug and visu2019-02-11T09:51:01+01:00Maxime MannoN g6 ont qc bug and visuV3.2.3Maxime MannoMaxime Mannohttps://forgemia.inra.fr/genotoul-bioinfo/ng6/-/merge_requests/23ONT - remove format file parameter2019-02-12T15:06:12+01:00Maxime MannoONT - remove format file parameterV3.2.3Maxime MannoMaxime Mannohttps://forgemia.inra.fr/genotoul-bioinfo/ng6/-/merge_requests/24Ng6 ont qc update2019-04-10T17:10:32+02:00Maxime MannoNg6 ont qc updateV3.2.4Maxime MannoMaxime Mannohttps://forgemia.inra.fr/genotoul-bioinfo/ng6/-/merge_requests/25Update visualisation of RunStat ONT : update help2019-04-17T13:26:17+02:00Maxime MannoUpdate visualisation of RunStat ONT : update helpV3.2.4Maxime MannoMaxime Mannohttps://forgemia.inra.fr/genotoul-bioinfo/ng6/-/merge_requests/26Ontqc updatestats2019-07-24T09:42:21+02:00Maxime MannoOntqc updatestatsUpdate ONT_QC analysis to fit with the R scriptUpdate ONT_QC analysis to fit with the R scriptV3.2.3.1Maxime MannoMaxime Mannohttps://forgemia.inra.fr/genotoul-bioinfo/ng6/-/merge_requests/27Add N10 read lenght to the ont_qc run status2019-07-25T11:48:23+02:00Maxime MannoAdd N10 read lenght to the ont_qc run statusV3.2.3.1Maxime MannoMaxime Mannohttps://forgemia.inra.fr/genotoul-bioinfo/ng6/-/merge_requests/33Modification for duplicate search and visualisation ok2019-08-30T14:58:57+02:00Claire KuchlyModification for duplicate search and visualisation okV3.2.5Claire KuchlyClaire Kuchlyhttps://forgemia.inra.fr/genotoul-bioinfo/ng6/-/merge_requests/32Merge branch Issue#104 into master2019-08-30T14:59:01+02:00Romain ThervilleMerge branch Issue#104 into masterFixes the infinite loading when the "downloadsymlink" workflow status is returned as "failed" (When the typed passord is incorrect).Fixes the infinite loading when the "downloadsymlink" workflow status is returned as "failed" (When the typed passord is incorrect).V3.2.5https://forgemia.inra.fr/genotoul-bioinfo/ng6/-/merge_requests/34Issue#1162019-08-30T15:45:23+02:00Romain ThervilleIssue#116New custom message indicating expiration dates (runs and analysis)New custom message indicating expiration dates (runs and analysis)V3.2.5https://forgemia.inra.fr/genotoul-bioinfo/ng6/-/merge_requests/37Ng6 ont demultiplex2019-09-11T10:58:47+02:00Maxime MannoNg6 ont demultiplexMerge new features : add log to ONT analysis and prepare demultiplex statsMerge new features : add log to ONT analysis and prepare demultiplex statsMaxime MannoMaxime Mannohttps://forgemia.inra.fr/genotoul-bioinfo/ng6/-/merge_requests/39Merge branch Issue#31 with master2019-09-13T11:42:30+02:00Romain ThervilleMerge branch Issue#31 with masterThe purge demand mail has been enhanced with clear names and links for runs an analyzes.The purge demand mail has been enhanced with clear names and links for runs an analyzes.V3.2.6Romain ThervilleRomain Thervillehttps://forgemia.inra.fr/genotoul-bioinfo/ng6/-/merge_requests/44Merge branch Issue#27 with master2019-09-27T09:14:59+02:00Romain ThervilleMerge branch Issue#27 with masterFixes the analyzes and runs count in the project view, the hidden ones will not be counted.Fixes the analyzes and runs count in the project view, the hidden ones will not be counted.V3.2.6Romain ThervilleRomain Thervillehttps://forgemia.inra.fr/genotoul-bioinfo/ng6/-/merge_requests/46Merge branch Issue#128 with master2019-09-27T09:15:53+02:00Romain ThervilleMerge branch Issue#128 with masterEmails declared in typo3->email_to_discard will be removed from the purge mail's recipient list.
The emails have to be separated with ',' and no space.Emails declared in typo3->email_to_discard will be removed from the purge mail's recipient list.
The emails have to be separated with ',' and no space.V3.2.6Romain ThervilleRomain Thervillehttps://forgemia.inra.fr/genotoul-bioinfo/ng6/-/merge_requests/45Merge branch Issue#127 with master2019-09-27T09:18:21+02:00Romain ThervilleMerge branch Issue#127 with masterThe send_purge_mail method has been reworked to send the mail to every admin, manager et member link to the project.The send_purge_mail method has been reworked to send the mail to every admin, manager et member link to the project.V3.2.6Romain ThervilleRomain Thervillehttps://forgemia.inra.fr/genotoul-bioinfo/ng6/-/merge_requests/49Issue#1292019-10-09T15:49:56+02:00Romain ThervilleIssue#129**New project space_id migration workflow**
Allows to migrate a project to another space_id, defined in application.properties .
The corresponding files are moved, and the old directories are deleted.
The projects's runs and analyse...**New project space_id migration workflow**
Allows to migrate a project to another space_id, defined in application.properties .
The corresponding files are moved, and the old directories are deleted.
The projects's runs and analyses's retentions are updated according to the values given in application.properties.
If the retention given is a period (not a date), the new retention is relative to the run or analysis's creation date.
**How to do it?**
python3.4 /save/ng6-test/src/ng6-git-rtherville/bin/ng6_cli.py switchprojectspaceid --project-id 1292 --space-id seqoccin --admin-login CTDV3.2.6Romain ThervilleRomain Thervillehttps://forgemia.inra.fr/genotoul-bioinfo/ng6/-/merge_requests/48N g6 ont demultiplex2019-10-10T13:48:38+02:00Maxime MannoN g6 ont demultiplexV3.2.6Maxime MannoMaxime Mannohttps://forgemia.inra.fr/genotoul-bioinfo/ng6/-/merge_requests/51Issue#1202019-10-10T15:51:37+02:00Romain ThervilleIssue#120Adds a new retention policy line in the single project view display.
For more informations, check https://forgemia.inra.fr/genotoul-bioinfo/ng6/issues/120 .Adds a new retention policy line in the single project view display.
For more informations, check https://forgemia.inra.fr/genotoul-bioinfo/ng6/issues/120 .V3.2.6Romain ThervilleRomain Therville