ng6 merge requestshttps://forgemia.inra.fr/genotoul-bioinfo/ng6/-/merge_requests2021-02-24T13:33:51+01:00https://forgemia.inra.fr/genotoul-bioinfo/ng6/-/merge_requests/114Merge branch Issue#189 with master2021-02-24T13:33:51+01:00Romain ThervilleMerge branch Issue#189 with masterResolves the issue #189.Resolves the issue #189.V3.2.8Romain ThervilleRomain Thervillehttps://forgemia.inra.fr/genotoul-bioinfo/ng6/-/merge_requests/109Merge branch Issue#190 with master2020-11-12T16:13:25+01:00Romain ThervilleMerge branch Issue#190 with masterUpdate to the purge process.
See the issue #190 for more infos.Update to the purge process.
See the issue #190 for more infos.V3.2.7.5Celine NoirotCeline Noirothttps://forgemia.inra.fr/genotoul-bioinfo/ng6/-/merge_requests/108Merge branch Issue#190 with master2020-11-12T11:50:15+01:00Romain ThervilleMerge branch Issue#190 with masterUpdate to the purge process.
See issue #190 for more infos.Update to the purge process.
See issue #190 for more infos.V3.2.7.5Romain ThervilleRomain Thervillehttps://forgemia.inra.fr/genotoul-bioinfo/ng6/-/merge_requests/117Merge branch Issue#193 with master2021-03-22T17:06:07+01:00Romain ThervilleMerge branch Issue#193 with masterHidden runs and analyzes are still included in the purge process, but do not appear in the alert mails anymore (Not in the lists, not in the computed sizes).
Issue #193Hidden runs and analyzes are still included in the purge process, but do not appear in the alert mails anymore (Not in the lists, not in the computed sizes).
Issue #193V3.2.8Romain ThervilleRomain Thervillehttps://forgemia.inra.fr/genotoul-bioinfo/ng6/-/merge_requests/120Merge branch Issue#196 with master2021-05-04T12:08:59+02:00Romain ThervilleMerge branch Issue#196 with masterUpdate to every php mail() function
A -f option has been implemented with the value "ng6-support@inrae.fr".
Issue #196Update to every php mail() function
A -f option has been implemented with the value "ng6-support@inrae.fr".
Issue #196V3.2.8Gerald Salingerald.salin@inra.frGerald Salingerald.salin@inra.frhttps://forgemia.inra.fr/genotoul-bioinfo/ng6/-/merge_requests/140Merge branch issue#228.2 with master2022-06-09T09:50:46+02:00Romain ThervilleMerge branch issue#228.2 with masterUpdate to ng6.php
- unhiding a run/analysis now only impacts the elements downward, an not
upward anymore.
Issue #228Update to ng6.php
- unhiding a run/analysis now only impacts the elements downward, an not
upward anymore.
Issue #228V3.3https://forgemia.inra.fr/genotoul-bioinfo/ng6/-/merge_requests/146Merge branch issue#240.2 with master2022-12-20T14:35:55+01:00Romain ThervilleMerge branch issue#240.2 with masterUpdate to the purge process
- Do not send purge alert mails if the demand only contains hidden
elements. (Issue #240)
- The hidden elements should appear in the admin area, in the DB demand,
should be purged, but not appear in any emai...Update to the purge process
- Do not send purge alert mails if the demand only contains hidden
elements. (Issue #240)
- The hidden elements should appear in the admin area, in the DB demand,
should be purged, but not appear in any email. (Issue #240)
Issue #240
This commit already includes the changes from the following commit :
bd50bd327d93aa4ffd66cd14cea4b673d41e0f3eV3.4.3https://forgemia.inra.fr/genotoul-bioinfo/ng6/-/merge_requests/44Merge branch Issue#27 with master2019-09-27T09:14:59+02:00Romain ThervilleMerge branch Issue#27 with masterFixes the analyzes and runs count in the project view, the hidden ones will not be counted.Fixes the analyzes and runs count in the project view, the hidden ones will not be counted.V3.2.6Romain ThervilleRomain Thervillehttps://forgemia.inra.fr/genotoul-bioinfo/ng6/-/merge_requests/39Merge branch Issue#31 with master2019-09-13T11:42:30+02:00Romain ThervilleMerge branch Issue#31 with masterThe purge demand mail has been enhanced with clear names and links for runs an analyzes.The purge demand mail has been enhanced with clear names and links for runs an analyzes.V3.2.6Romain ThervilleRomain Thervillehttps://forgemia.inra.fr/genotoul-bioinfo/ng6/-/merge_requests/61merge branche issue#119 with master2019-10-24T09:50:03+02:00Romain Thervillemerge branche issue#119 with masterUpdate the run and analysis display to add the data state, and retention limit.
commit 20f6a237798424ef1b82cb236ff21fbbaaba03be
issue #119Update the run and analysis display to add the data state, and retention limit.
commit 20f6a237798424ef1b82cb236ff21fbbaaba03be
issue #119V3.2.6Romain ThervilleRomain Thervillehttps://forgemia.inra.fr/genotoul-bioinfo/ng6/-/merge_requests/33Modification for duplicate search and visualisation ok2019-08-30T14:58:57+02:00Claire KuchlyModification for duplicate search and visualisation okV3.2.5Claire KuchlyClaire Kuchlyhttps://forgemia.inra.fr/genotoul-bioinfo/ng6/-/merge_requests/134Modification of BWA algo #2212022-02-14T09:43:27+01:00Jules SabbanModification of BWA algo #221Change BWA algo `aln` to `mem`.Change BWA algo `aln` to `mem`.Jules SabbanJules Sabbanhttps://forgemia.inra.fr/genotoul-bioinfo/ng6/-/merge_requests/48N g6 ont demultiplex2019-10-10T13:48:38+02:00Maxime MannoN g6 ont demultiplexV3.2.6Maxime MannoMaxime Mannohttps://forgemia.inra.fr/genotoul-bioinfo/ng6/-/merge_requests/21N g6 ont qc bug and visu2019-02-11T09:51:01+01:00Maxime MannoN g6 ont qc bug and visuV3.2.3Maxime MannoMaxime Mannohttps://forgemia.inra.fr/genotoul-bioinfo/ng6/-/merge_requests/37Ng6 ont demultiplex2019-09-11T10:58:47+02:00Maxime MannoNg6 ont demultiplexMerge new features : add log to ONT analysis and prepare demultiplex statsMerge new features : add log to ONT analysis and prepare demultiplex statsMaxime MannoMaxime Mannohttps://forgemia.inra.fr/genotoul-bioinfo/ng6/-/merge_requests/24Ng6 ont qc update2019-04-10T17:10:32+02:00Maxime MannoNg6 ont qc updateV3.2.4Maxime MannoMaxime Mannohttps://forgemia.inra.fr/genotoul-bioinfo/ng6/-/merge_requests/50Ng6 slurm 10 x2019-10-10T16:51:42+02:00Claire KuchlyNg6 slurm 10 xAdd illumuna_qc_10X pipelines to ng6Add illumuna_qc_10X pipelines to ng6V3.2.6Romain ThervilleRomain Thervillehttps://forgemia.inra.fr/genotoul-bioinfo/ng6/-/merge_requests/5Ng6 software updates2018-08-02T13:14:22+02:00Maxime MannoNg6 software updatesV3.2 - SlurmMaxime MannoMaxime Mannohttps://forgemia.inra.fr/genotoul-bioinfo/ng6/-/merge_requests/23ONT - remove format file parameter2019-02-12T15:06:12+01:00Maxime MannoONT - remove format file parameterV3.2.3Maxime MannoMaxime Mannohttps://forgemia.inra.fr/genotoul-bioinfo/ng6/-/merge_requests/26Ontqc updatestats2019-07-24T09:42:21+02:00Maxime MannoOntqc updatestatsUpdate ONT_QC analysis to fit with the R scriptUpdate ONT_QC analysis to fit with the R scriptV3.2.3.1Maxime MannoMaxime Manno