ng6 merge requestshttps://forgemia.inra.fr/genotoul-bioinfo/ng6/-/merge_requests2020-06-04T10:20:45+02:00https://forgemia.inra.fr/genotoul-bioinfo/ng6/-/merge_requests/106Merge branch issue#129 with dev2020-06-04T10:20:45+02:00Romain ThervilleMerge branch issue#129 with devThe switchspaceid workflow has been made to update the paths to the migrated analysis files (broken links and missing files).
Issue#129The switchspaceid workflow has been made to update the paths to the migrated analysis files (broken links and missing files).
Issue#129Celine NoirotCeline Noirothttps://forgemia.inra.fr/genotoul-bioinfo/ng6/-/merge_requests/105Merge branch Master with dev2020-04-03T15:14:34+02:00Romain ThervilleMerge branch Master with devApplies the last commits to the dev branch.
Correct issues #171 #175Applies the last commits to the dev branch.
Correct issues #171 #175V3.2.7Romain ThervilleRomain Thervillehttps://forgemia.inra.fr/genotoul-bioinfo/ng6/-/merge_requests/156update project list to include projects with only analyses2024-03-14T12:30:11+01:00Gerald Salingerald.salin@inra.frupdate project list to include projects with only analysesV3.4.6Gerald Salingerald.salin@inra.frGerald Salingerald.salin@inra.frhttps://forgemia.inra.fr/genotoul-bioinfo/ng6/-/merge_requests/146Merge branch issue#240.2 with master2022-12-20T14:35:55+01:00Romain ThervilleMerge branch issue#240.2 with masterUpdate to the purge process
- Do not send purge alert mails if the demand only contains hidden
elements. (Issue #240)
- The hidden elements should appear in the admin area, in the DB demand,
should be purged, but not appear in any emai...Update to the purge process
- Do not send purge alert mails if the demand only contains hidden
elements. (Issue #240)
- The hidden elements should appear in the admin area, in the DB demand,
should be purged, but not appear in any email. (Issue #240)
Issue #240
This commit already includes the changes from the following commit :
bd50bd327d93aa4ffd66cd14cea4b673d41e0f3eV3.4.3https://forgemia.inra.fr/genotoul-bioinfo/ng6/-/merge_requests/140Merge branch issue#228.2 with master2022-06-09T09:50:46+02:00Romain ThervilleMerge branch issue#228.2 with masterUpdate to ng6.php
- unhiding a run/analysis now only impacts the elements downward, an not
upward anymore.
Issue #228Update to ng6.php
- unhiding a run/analysis now only impacts the elements downward, an not
upward anymore.
Issue #228V3.3https://forgemia.inra.fr/genotoul-bioinfo/ng6/-/merge_requests/139Revert "Merge branch 'issue#228' into 'master'"2022-06-09T09:50:24+02:00Romain ThervilleRevert "Merge branch 'issue#228' into 'master'"This reverts merge request !138
issue #228This reverts merge request !138
issue #228V3.3https://forgemia.inra.fr/genotoul-bioinfo/ng6/-/merge_requests/138Merge branch issue#228 with master2022-06-08T10:05:27+02:00Romain ThervilleMerge branch issue#228 with masterUpdate to the hide/unhide features
- Unhiding a run will no longer unhide the analyses below.
- Unhiding a project will no longer unhide the runs and analyses below.
- Unhiding an analysis will no longer unhide the run and project above...Update to the hide/unhide features
- Unhiding a run will no longer unhide the analyses below.
- Unhiding a project will no longer unhide the runs and analyses below.
- Unhiding an analysis will no longer unhide the run and project above.
Issue #228V3.3https://forgemia.inra.fr/genotoul-bioinfo/ng6/-/merge_requests/133Merge branch issue#218 with master2022-01-07T10:51:49+01:00Romain ThervilleMerge branch issue#218 with masterUpdate to AnalysisTemplate.tpl
In the "download" analysis tab, the .png files are not excluded from the
list anymore.
Issue #218Update to AnalysisTemplate.tpl
In the "download" analysis tab, the .png files are not excluded from the
list anymore.
Issue #218https://forgemia.inra.fr/genotoul-bioinfo/ng6/-/merge_requests/132Merge branch issue#216 with master2021-12-06T18:06:38+01:00Romain ThervilleMerge branch issue#216 with masterUpdate to nG6_utils.php
The path to application.properties has been fixed
Issue #216Update to nG6_utils.php
The path to application.properties has been fixed
Issue #216https://forgemia.inra.fr/genotoul-bioinfo/ng6/-/merge_requests/131Merge branch issue#217 with master2021-12-06T18:07:11+01:00Romain ThervilleMerge branch issue#217 with masterUpdate to class.tx_nG6_pi6_purge.php
on line 173, the purge_delay param had 2 $.
Issue #217Update to class.tx_nG6_pi6_purge.php
on line 173, the purge_delay param had 2 $.
Issue #217https://forgemia.inra.fr/genotoul-bioinfo/ng6/-/merge_requests/128Merge branch issue#210 and master2021-06-03T18:21:02+02:00Romain ThervilleMerge branch issue#210 and masterUpdate to class.tx_nG6_eid.php
The ssh user test has been fixed (there was a permission error).
Issue #210Update to class.tx_nG6_eid.php
The ssh user test has been fixed (there was a permission error).
Issue #210V3.3Romain ThervilleRomain Thervillehttps://forgemia.inra.fr/genotoul-bioinfo/ng6/-/merge_requests/126Merge branch Issue#205 with master2021-05-06T11:35:37+02:00Romain ThervilleMerge branch Issue#205 with masterUpdate to utils.php
The path to the PasswordHashFactory class has been updated with the new
typo3 version. This commit fixes the hash_password() function.
Issue#205Update to utils.php
The path to the PasswordHashFactory class has been updated with the new
typo3 version. This commit fixes the hash_password() function.
Issue#205V3.3https://forgemia.inra.fr/genotoul-bioinfo/ng6/-/merge_requests/118Merge branch Dev with Master2021-03-25T10:51:01+01:00Romain ThervilleMerge branch Dev with MasterMassive update to the purge process
- The multiple "esitoul" email adresses in the purge mail's "cc" field have been fixed. Issue #195
- The hidden runs and analyzes will not appear anymore in the purge mail (and resent purge mail), no...Massive update to the purge process
- The multiple "esitoul" email adresses in the purge mail's "cc" field have been fixed. Issue #195
- The hidden runs and analyzes will not appear anymore in the purge mail (and resent purge mail), nor in the volume counts for each purge demand, but are still recorded in our database. Issues #193, #178
- If a purge demand is already declared for a project (and still pending), and an admin tries to open a new one, a SQL trigger is called to prevent the insertion. This results in a mail sent to the nG6 admins, informing them that no new demand can be openned (for this project) as long as the old one has not been treated. Issue #192V3.2.8Romain ThervilleRomain Thervillehttps://forgemia.inra.fr/genotoul-bioinfo/ng6/-/merge_requests/115Merge branch issue#195 with master2021-03-19T17:04:11+01:00Romain ThervilleMerge branch issue#195 with masterUpdate to the purge process
- Fix for the multiple "esitoul@inrae.fr" adresses in the cc mail field.
issue #195Update to the purge process
- Fix for the multiple "esitoul@inrae.fr" adresses in the cc mail field.
issue #195V3.2.8Romain ThervilleRomain Thervillehttps://forgemia.inra.fr/genotoul-bioinfo/ng6/-/merge_requests/113Merge branch Issue#192 with master2021-02-15T10:48:43+01:00Romain ThervilleMerge branch Issue#192 with masterNew logs added to the purge process, related to the issue #192.New logs added to the purge process, related to the issue #192.V3.2.8Romain ThervilleRomain Thervillehttps://forgemia.inra.fr/genotoul-bioinfo/ng6/-/merge_requests/112#191 Correcting the issue on ont_qc2021-02-15T10:45:26+01:00Audrey Gibert#191 Correcting the issue on ont_qcCorrection of an issue occuring when more than 8 samples are multiplexed on ONT technology. Small code changing but big result to come!Correction of an issue occuring when more than 8 samples are multiplexed on ONT technology. Small code changing but big result to come!V3.2.8Romain ThervilleRomain Thervillehttps://forgemia.inra.fr/genotoul-bioinfo/ng6/-/merge_requests/111Update to the analysis.py class2020-11-24T10:31:03+01:00Romain ThervilleUpdate to the analysis.py classNew get_directory() function for the analysis.py class.
(There was an AttributeError: 'Run_stats' object has no attribute 'get_web_filepath' error. )
issue #129New get_directory() function for the analysis.py class.
(There was an AttributeError: 'Run_stats' object has no attribute 'get_web_filepath' error. )
issue #129V3.2.7.5Romain ThervilleRomain Thervillehttps://forgemia.inra.fr/genotoul-bioinfo/ng6/-/merge_requests/107Merge branch Dev with master2020-06-04T14:42:04+02:00Romain ThervilleMerge branch Dev with masterFix for the issue #129.Fix for the issue #129.V3.2.7.2Romain ThervilleRomain Thervillehttps://forgemia.inra.fr/genotoul-bioinfo/ng6/-/merge_requests/104Migration issues2020-04-03T15:08:46+02:00Celine NoirotMigration issuesCorrect issues #171 #175Correct issues #171 #175V3.2.7Romain ThervilleRomain Thervillehttps://forgemia.inra.fr/genotoul-bioinfo/ng6/-/merge_requests/103Merge branch issue#138 with dev2020-03-18T18:06:18+01:00Romain ThervilleMerge branch issue#138 with devUpdate to the run table properties
The date sorting has been fixed, the column type was set to "date"
instead of "date-eu".
Issue #138Update to the run table properties
The date sorting has been fixed, the column type was set to "date"
instead of "date-eu".
Issue #138V3.2.8Celine NoirotCeline Noirot