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  • genotoul-bioinfo
  • ng6ng6
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  • #106

Closed
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Created Mar 11, 2019 by Celine Noirot@celine.noirotOwner

Configuring different storage space

Add a workflow parameter to store raw data and processed results in different storage space depending on project (ng6 or seqoccin or labs ?)

Warn:

  • Quality control must be keep even if storage space is deleted, must be store in in ng6 space ?
  • Think to handle data purge (do not delete if it's in rented space), check administration purge.

Code :

  • web interface:

    • storage info is stored in application.properties and db
    • file eg: run_view.tmpl use relative path : {$link=(('fileadmin'|cat:$runs[key($runs)].directory)|cat:'/')|cat:$file}
    • statistics storage space: check and define how to handle those spaces
  • jflow code :

    • application.properties will contain new section for storage space defined py project/lab name
    • the storage space name is linked to a project
    • functions get_save_directory() ... has to be adapted
    • db must contain storage space name
  • filesystem

    • web interface: create symbolic link in fileadmin directory on different spaces
    • adding new storage space, create symbolic link (look at how is done in jflow for [storage] section
    • only project table has new attribute storage space
Edited Aug 30, 2019 by Gerald Salin
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