1. 17 Sep, 2018 1 commit
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    • Penom Nom's avatar
      update dowload components to properly clos filehandlers. Update CASAVANG6WF... · d6eaacde
      Penom Nom authored
      update dowload components to properly clos filehandlers. Update CASAVANG6WF class to add a funtion that will run all casava specific process (illumina filter, demultiplexstat etc...) This makes the code cleaner for all casavang6workflows. This class has also been updated to be able to use --sample option.
      d6eaacde
  8. 16 Apr, 2015 2 commits
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  11. 10 Mar, 2015 1 commit
    • Penom Nom's avatar
      fix : · 9376fd02
      Penom Nom authored
       * rseqc template file
       * star analysis
       * illumina_rnaseq
       * illumina_diversity_qc
      
      update illumina_rnaseq data with a casava directory
      9376fd02
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