Commits · ba67ea5758ff44b739a11b889bf7652725e2d40a · genotoul-bioinfo / ng6

25 Jan, 2011 1 commit
- No commit message · ba67ea57
  Jerome Mariette authored Jan 25, 2011
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  ba67ea57
21 Jan, 2011 3 commits
- generate xml file instead of html · 6102b193
  Jerome Mariette authored Jan 21, 2011
  
  6102b193
- french version · 07a79c89
  Penom Nom authored Jan 21, 2011
  
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- first xslt files for xml->html conversion · dd7ee4ce
  Penom Nom authored Jan 21, 2011
  
  dd7ee4ce
17 Jan, 2011 2 commits
- No commit message · b7beb940
  Jerome Mariette authored Jan 17, 2011
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  b7beb940
- delete alignement against phage · f4283a52
  Jerome Mariette authored Jan 17, 2011
  
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14 Jan, 2011 3 commits
- No commit message · 3ccde7b6
  Jerome Mariette authored Jan 14, 2011
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  3ccde7b6
- No commit message · 2511801b
  Jerome Mariette authored Jan 14, 2011
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  2511801b
- restore qseq_demultiplex into the pipeline (delete it for other lanes) · bcf95a89
  Penom Nom authored Jan 14, 2011
  
  bcf95a89
13 Jan, 2011 19 commits
- fix variable · 08e08a04
  Penom Nom authored Jan 13, 2011
  
  08e08a04
- No commit message · 39c2ef77
  Jerome Mariette authored Jan 13, 2011
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  39c2ef77
- fix input: feed on fastq, not qseq files · d9bcca7e
  Penom Nom authored Jan 13, 2011
  
  d9bcca7e
- fixing varaibles call · 4a65c376
  Penom Nom authored Jan 13, 2011
  
  4a65c376
- fix filter_empty_files position · a505aee8
  Penom Nom authored Jan 13, 2011
  
  a505aee8
- filter files just before concatenateqseq2fastq · 464a2ed5
  Penom Nom authored Jan 13, 2011
  
  464a2ed5
- No commit message · 3f49ad2f
  Jerome Mariette authored Jan 13, 2011
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  3f49ad2f
- update mids pipeline (remove list of lists, add multiple files iteration) · 0537618f
  Penom Nom authored Jan 13, 2011
  
  0537618f
- No commit message · 4f297606
  Jerome Mariette authored Jan 13, 2011
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  4f297606
- No commit message · b1925071
  Jerome Mariette authored Jan 13, 2011
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  b1925071
- No commit message · 03c7bd44
  Jerome Mariette authored Jan 13, 2011
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  03c7bd44
- No commit message · 4a92f1c3
  Jerome Mariette authored Jan 13, 2011
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  4a92f1c3
- No commit message · 48208945
  Jerome Mariette authored Jan 13, 2011
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  48208945
- No commit message · d0da0372
  Jerome Mariette authored Jan 13, 2011
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  d0da0372
- No commit message · b09e5f37
  Jerome Mariette authored Jan 13, 2011
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  b09e5f37
- No commit message · 05af298e
  Jerome Mariette authored Jan 13, 2011
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- No commit message · be16b278
  Jerome Mariette authored Jan 13, 2011
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  be16b278
- No commit message · 36c2010c
  Jerome Mariette authored Jan 13, 2011
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  36c2010c
- add regexp to know the pairend posicion to bwa_contamination_search2ng6 · 4cde327d
  Jerome Mariette authored Jan 13, 2011
  
  4cde327d
12 Jan, 2011 12 commits
- No commit message · a51c3fb9
  Jerome Mariette authored Jan 12, 2011
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  a51c3fb9
- add regexp to fastqc2ng6 to know where is the pairend information · 438a459d
  Jerome Mariette authored Jan 12, 2011
  
  438a459d
- No commit message · 89d315dc
  Jerome Mariette authored Jan 12, 2011
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  89d315dc
- No commit message · 6d78822b
  Jerome Mariette authored Jan 12, 2011
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  6d78822b
- modify bwa_sam so the database name is in the result name · fcc6e4f5
  Jerome Mariette authored Jan 12, 2011
  
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- No commit message · fc59fe19
  Jerome Mariette authored Jan 12, 2011
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  fc59fe19
- No commit message · e4dc6766
  Jerome Mariette authored Jan 12, 2011
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- No commit message · da22fd62
  Jerome Mariette authored Jan 12, 2011
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  da22fd62
- modify bwa_aln so the output is a sai · 9d23590d
  Jerome Mariette authored Jan 12, 2011
  
  9d23590d
- modify illumina_default pipeline · a7660129
  Jerome Mariette authored Jan 12, 2011
  
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- fix stdout: too much '$' · 51b97a14
  Penom Nom authored Jan 12, 2011
  
  51b97a14
- add a rename files component to illumina_default · 9cbc2016
  Penom Nom authored Jan 12, 2011
  
  9cbc2016