Commits · aaab2a461a585415cbaccd20477b3630c89a9c7c · genotoul-bioinfo / ng6

30 Jul, 2018 1 commit
- Ajout d'explication sur les index inconnus affichés dans le tableau · aaab2a46
  Audrey Gibert authored Jul 30, 2018
```
demultiplexStats
```
  aaab2a46
29 Jun, 2018 1 commit
- Adaptation des scripts pour PicardTools 2.14.1 SGE · cf22986c
  Audrey Gibert authored Jun 29, 2018
  
  cf22986c
22 May, 2018 2 commits
- Merge branch 'nG6-Software_updates' of... · 1ae31924
  Maxime Manno authored May 22, 2018
```
Merge branch 'nG6-Software_updates' of https://forgemia.inra.fr/genotoul-bioinfo/ng6.git into nG6-Software_updates
```
  1ae31924
- Samtools Update : Update supplimentary option #7 · 24a027d0
  Maxime Manno authored May 15, 2018
  
  24a027d0
15 May, 2018 1 commit
- Samtools Update : missing one occurrence #7 · b16e4405
  Maxime Manno authored May 15, 2018
  
  b16e4405
10 Apr, 2018 1 commit

Maxime Manno authored Apr 10, 2018

Change samtools sort option
adding of -o, and removing of the renaming of the output

2b87102f

09 Apr, 2018 1 commit
- Vérification de la bonne marche du commit #6 · 876cd89b
  Audrey Gibert authored Apr 09, 2018
  
  876cd89b
13 Mar, 2018 1 commit
- Merge branch 'test-mmanno' into 'master' · bc3d51ce
  Claire Kuchly authored Mar 13, 2018
```
Test mmanno barcode visu

See merge request !2
```
  bc3d51ce
08 Mar, 2018 1 commit
- Change default archive name · 9bfb3a76
  Maxime Manno authored Mar 08, 2018
  
  9bfb3a76
05 Mar, 2018 3 commits
- Change nb thread default for porechop · b3a4e2c3
  Maxime Manno authored Mar 05, 2018
  
  b3a4e2c3
- Change nb thread default for porechop · 2ff3b6bb
  Maxime Manno authored Mar 05, 2018
  
  2ff3b6bb
- Change nb thread in trimporechop.py · df449bf8
  Maxime Manno authored Mar 05, 2018
  
  df449bf8
01 Mar, 2018 3 commits
- Add trimporechop component · 6e782aeb
  Maxime Manno authored Mar 01, 2018
  
  6e782aeb
- Add trimporchop component · f01a98e3
  Maxime Manno authored Mar 01, 2018
  
  f01a98e3
- Add trimporchop component · 6d118a0b
  Maxime Manno authored Mar 01, 2018
  
  6d118a0b
01 Feb, 2018 1 commit
- Update run_stats template : barcode results table · 1667758a
  Maxime Manno authored Feb 01, 2018
  
  1667758a
30 Jan, 2018 5 commits
- Update barcode metrics table · 272ab220
  Maxime Manno authored Jan 30, 2018
  
  272ab220
- remove qscorevariation plot from barcode visu · e59f4830
  maxime.manno authored Jan 30, 2018
  
  e59f4830
- remove-test · a42371ea
  Maxime Manno authored Jan 30, 2018
  
  a42371ea
- Merge branch 'test-mmanno' of https://forgemia.inra.fr/genotoul-bioinfo/ng6.git into test-mmanno · f3e2926a
  Maxime Manno authored Jan 30, 2018
  
  f3e2926a
- test · e2995d71
  Maxime Manno authored Jan 25, 2018 and Maxime Manno committed Jan 30, 2018
  
  e2995d71
25 Jan, 2018 2 commits
- Merge branch 'patch-1' into 'master' · fe6e352f
  Maxime Manno authored Jan 25, 2018
```
Update run_stats.py : missing one line

See merge request !1
```
  fe6e352f
- Revert "Update insertssizes.py : update java parameters for Process inserts sizes…" · 5159767a
  Maxime Manno authored Jan 25, 2018
```
This reverts commit aa4a7a63
```
  5159767a
24 Jan, 2018 7 commits
- Update __init__.py : Commit from production file · 3dc599e7
  Maxime Manno authored Jan 24, 2018
  
  3dc599e7
- Update usearchdereplication.py : update ShellFunction usearch from production file · 88fa2e34
  Maxime Manno authored Jan 24, 2018
  
  88fa2e34
- Update insertssizes.py : update java parameters for Process inserts sizes... · aa4a7a63
  Maxime Manno authored Jan 24, 2018
```
Update insertssizes.py : update java parameters for Process inserts sizes metrics from production file
```
  aa4a7a63
- Update fastqilluminafilter.py : Change description - Casava version · 13d8b68a
  Maxime Manno authored Jan 24, 2018
  
  13d8b68a
- Update fastqc.py : Modif on the prod and not commited · d3006ec0
  Maxime Manno authored Jan 24, 2018
  
  d3006ec0
- Update __init__.py : Update compression default from none to gz · f6749326
  Maxime Manno authored Jan 24, 2018
  
  f6749326
- Update run_stats.py : missing one line · c4b953b6
  Maxime Manno authored Jan 24, 2018
  
  c4b953b6
23 Jan, 2018 7 commits
- Delete .pydevproject · 1527e5e2
  Jerome Mariette authored Jan 23, 2018
  
  1527e5e2
- Delete .project · 21083fff
  Jerome Mariette authored Jan 23, 2018
  
  21083fff
- purge management : add with lab filter · e9e75089
  Celine Noirot authored Jan 23, 2018
  
  e9e75089
- Run with barcode visualisation, part 1 before migration to git · 07a6a5d3
  maxime mano authored Jan 23, 2018
  
  07a6a5d3
- Run with barcode visualisation, part 1 before migration to git · e8318912
  maxime mano authored Jan 23, 2018
  
  e8318912
- Run with barcode visualisation, part 1 before migration to git · 78b07f36
  maxime mano authored Jan 23, 2018
  
  78b07f36
- Run with barcode visualisation, part 1 before migration to git · 648e628e
  maxime mano authored Jan 23, 2018
  
  648e628e
11 Jan, 2018 3 commits
- add with lab implie · acb642e7
  Celine Noirot authored Jan 11, 2018
  
  acb642e7
- mail correction · 24737ffe
  Celine Noirot authored Jan 11, 2018
  
  24737ffe
- Finalization of purge managment · 1b1469fb
  Celine Noirot authored Jan 11, 2018
  
  1b1469fb