1. 13 Jan, 2020 1 commit
    • Romain Therville's avatar
      Update to the single project view page · 12e21ebb
      Romain Therville authored
      The 'switch_space_id' migration workflow is now displayed for the
      current project's administrator users.
      (table fe_rights, right_level = 2)
      
      Superadmin users can still launch the migration of any project.
      
      (issue #129)
      12e21ebb
  2. 08 Jan, 2020 1 commit
  3. 09 Dec, 2019 1 commit
    • Romain Therville's avatar
      Update for move_project.py · 13279d3d
      Romain Therville authored
      - I have removed the "local = True" parameter to execute the workflow on
      the computing cluster instead of ng6's host.
      (It was a test parameter, only meant for testing.)
      
      issue #129
      13279d3d
  4. 28 Nov, 2019 1 commit
    • Romain Therville's avatar
      Huge update for the new migration workflow: · db1b75b8
      Romain Therville authored
      - New name : switch_space_id.
      - The given space id is checked in application.properties.
      - Most of the treatments have been moved to a "components" folder,
      allowing us to create easily a new "migrate_several_projects" (or
      "bulk_project_migration") later.
      - The workflow can be launched from the single project view on the nG6
      website, when logged a superadmin user.
      - The project's space_id is visible to everyone on the single project
      view.
      - A warning indicating that the migration updates the retention has been
      added to the workflow's form in single project view.
      - More logs in ng6.log, and the new log file MoveProject.stdout. (path
      exemple : [...]/jflow/work/switchspaceid/wf000452/MoveProject_default/MoveProject.stdout)
      - CSS updates for the project views.
      - For new space_ids, the <space_id>/run and <space_id>/analyze
      directories will be created if missing.
      
      
      Issue#129
      db1b75b8
  5. 19 Nov, 2019 1 commit
  6. 18 Nov, 2019 1 commit
    • Romain Therville's avatar
      Update to make the switch_space_id work. · 7c169bce
      Romain Therville authored
      - The type ng6space has been debugged.
      - The workflow now generates a .stdout trace file.
      - The synthax has changed: python3.4
      /save/ng6-test/src/ng6-git-rtherville/bin/ng6_cli.py switchspaceid
      --project-id 1293 --space-id seqoccin --admin-login CTD
      
      issue #129
      7c169bce
  7. 12 Nov, 2019 1 commit
  8. 28 Oct, 2019 4 commits
  9. 25 Oct, 2019 1 commit
    • Audrey Gibert's avatar
      [ont_qc>__init__] · eaeee36f
      Audrey Gibert authored
      Logs are retrieved from the path of fastq files, and not on the working
      directory
      eaeee36f
  10. 24 Oct, 2019 4 commits
  11. 23 Oct, 2019 1 commit
  12. 22 Oct, 2019 2 commits
  13. 17 Oct, 2019 6 commits
  14. 16 Oct, 2019 3 commits
  15. 14 Oct, 2019 4 commits
  16. 10 Oct, 2019 3 commits
  17. 09 Oct, 2019 4 commits
  18. 08 Oct, 2019 1 commit
    • Romain Therville's avatar
      Update for issue #129 · f9366424
      Romain Therville authored
      The srcipt had to be reworked, the retention period was relative to
      "today", we wanted it relative to "the run or analysis's creation date".
      Also, a message is raised and the process is stopped if the project
      already belongs to the given space_id.
      
      issue #129
      f9366424