Commit f6749326 authored by Maxime Manno's avatar Maxime Manno 🍜
Browse files

Update __init__.py : Update compression default from none to gz

parent c4b953b6
......@@ -28,7 +28,7 @@ class OntQualityCheck (NG6Workflow):
def define_parameters(self, function="process"):
logging.getLogger("jflow").debug("Begin OntQualityCheck.define_parameters! ont_qc")
self.add_parameter("compression", "How should the data be compressed once archived", choices= [ "none", "gz", "bz2"], default = "none")
self.add_parameter("compression", "How should the data be compressed once archived", choices= [ "none", "gz", "bz2"], default = "gz")
#self.add_parameter("nb_threads", "Number of threads to use for fastqc. Each thread will be allocated 250MB of memory.", default=6)
#self.add_parameter("nanoplot_color", "Color of nanoplot")
self.add_input_file( "summary_file", "Input summary basecalling file", default=None)
......
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