Commit e94e96d6 authored by maxime mano's avatar maxime mano
Browse files

Amélioration de l'affichage des paramètres

parent ac60fda7
......@@ -173,9 +173,9 @@ class RS_Subreads (Analysis):
self.description = "Run SMRTAnalysis RS_Subreads.1"
self.software = "Python"
if self.barcode_file :
self.options = "minSubReadLength %s readScore %s minLength %s Barcode file %s Barcode score %s"%(self.min_subreads_length, self.polymerase_read_qual, self.polymerase_read_length, self.barcode_file, self.barcode_score)
self.options = "minSubReadLength %s readScore %s minLength %s barcode_file %s barcode_score %s"%(self.min_subreads_length, self.polymerase_read_qual, self.polymerase_read_length, self.barcode_file, self.barcode_score)
else :
self.options = "minSubReadLength %s readScore %s minLength %s"%(self.min_subreads_length, self.polymerase_read_qual, self.polymerase_read_length)
self.options = "minSubReadLength %s readScore %s minLength %s"%(self.min_subreads_length, self.polymerase_read_qual, self.polymerase_read_length)
def post_process(self):
logging.getLogger("jflow").debug("Begin RS_Subreads.post_process!")
......
Supports Markdown
0% or .
You are about to add 0 people to the discussion. Proceed with caution.
Finish editing this message first!
Please register or to comment