Commit e6478a69 authored by Penom Nom's avatar Penom Nom
Browse files

Fix bug with software path.

parent b246a603
......@@ -216,7 +216,7 @@ class Cdhit (Analysis):
tmp_fasta_files = self.get_outputs('{basename_woext}', self.input_fasta)
# Build clusters
cdhit = ShellFunction( self.get_exec_path("cdhit") + " -i $1 -o $2 -d 0 " + self.cdhit_options + " 2>> " + self.stderr, cmd_format='{EXE} {IN} {OUT}' )
cdhit = ShellFunction( self.get_exec_path("cd-hit") + " -i $1 -o $2 -d 0 " + self.cdhit_options + " 2>> " + self.stderr, cmd_format='{EXE} {IN} {OUT}' )
cdhit = MultiMap( cdhit, inputs=self.input_fasta, outputs=[tmp_fasta_files, self.cluster_files] )
# Rename cluster's sequences
......
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