Commit df449bf8 authored by Maxime Manno's avatar Maxime Manno 🍜
Browse files

Change nb thread in trimporechop.py

parent 6e782aeb
......@@ -29,7 +29,7 @@ class Trim_porechop (Analysis):
This module trim the reads from ONT data
"""
def define_parameters(self, fastq_files, nbthreads=4, formatfile="fastq", discard_middle="discard_middle", archivename="porechop_archive"):
def define_parameters(self, fastq_files, nbthreads=16, formatfile="fastq", discard_middle="discard_middle", archivename="porechop_archive"):
self.add_input_file_list( "fastq_files", "fastq_files", default=fastq_files, required=True, file_format = 'fastq')
self.add_parameter("nbthreads", "number of threads to use", default=nbthreads, type='int')
self.add_parameter("formatfile", "format of the input files", default=formatfile, type='str')
......
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