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Commit d1a02287 authored by Celine Noirot's avatar Celine Noirot
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uncoment remove file

parent 4e492c6f
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454/bin/adaptorcleaner.py
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......@@ -96,8 +96,8 @@ def mask_sequences (fafile, len_adapt, options, log, minscore,minmatch , tab_ada
log.write("###Number of sequences with adaptor "+ adapt_ids + " " +str(len(adaptators_found.keys())) +" \n")
# Clean up temp files
#os.remove(os.path.join(options.output, os.path.basename(options.fasta) + "."+ adapt_ids + ".oligo"))
#os.remove(os.path.join(options.output, os.path.basename(options.fasta)) + "."+ adapt_ids + ".cross_match.res")
os.remove(os.path.join(options.output, os.path.basename(options.fasta) + "."+ adapt_ids + ".oligo"))
os.remove(os.path.join(options.output, os.path.basename(options.fasta)) + "."+ adapt_ids + ".cross_match.res")
return(os.path.join(options.output, os.path.basename(options.fasta) + "."+ adapt_ids + ".screen.fasta"))
......
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