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genotoul-bioinfo
ng6
Commits
c02da34f
Commit
c02da34f
authored
Feb 18, 2019
by
Maxime Manno
🍜
Browse files
Update : ont_qc : add % for number of reads and total bases
parent
2086c3ad
Changes
1
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Inline
Side-by-side
ui/nG6/pi1/analyzes/Run_stats.tpl
View file @
c02da34f
...
...
@@ -209,9 +209,9 @@ along with this program. If not, see <http://www.gnu.org/licenses/>.
{
foreach
from
=
$barcode_headers
key
=
k
item
=
head
}
{
if
$head
==
'total_bases'
}
<th
id=
"sample_
{
$i
}
_col_
{
$col_id
}
"
>
{($sample_results.$head)|number_format:0:',':' '}
</th>
<th
id=
"sample_
{
$i
}
_col_
{
$col_id
}
"
>
{($sample_results.$head)|number_format:0:',':' '}
({($sample_results.$head / $basic.total_bases*100)|number_format:2:',':' '}%)
</th>
{
elseif
$head
==
'nb_reads'
}
<th
id=
"sample_
{
$i
}
_col_
{
$col_id
}
"
>
{($sample_results.$head)|number_format:0:',':' '}
</th>
<th
id=
"sample_
{
$i
}
_col_
{
$col_id
}
"
>
{($sample_results.$head)|number_format:0:',':' '}
({($sample_results.$head / $basic.nb_reads*100)|number_format:2:',':' '}%)
</th>
{
elseif
$head
==
'median_read_length'
}
<th
id=
"sample_
{
$i
}
_col_
{
$col_id
}
"
>
{($sample_results.$head)|number_format:0:',':' '}
</th>
{
elseif
$head
==
'median_read_quality'
}
...
...
@@ -223,9 +223,9 @@ along with this program. If not, see <http://www.gnu.org/licenses/>.
{
elseif
$head
==
'median_yield_per_sec'
}
<th
id=
"sample_
{
$i
}
_col_
{
$col_id
}
"
>
{($sample_results.$head)|number_format:0:',':' '}
</th>
{
elseif
(
$head
==
'nb_read_utils'
)
or
(
$head
==
'nb_read_useful_data'
)
}
<th
id=
"sample_
{
$i
}
_col_
{
$col_id
}
"
>
{($sample_results.$head)|number_format:0:',':' '}
</th>
<th
id=
"sample_
{
$i
}
_col_
{
$col_id
}
"
>
{($sample_results.$head)|number_format:0:',':' '}
({($sample_results.$head / $basic.nb_reads*100)|number_format:2:',':' '}%)
</th>
{
elseif
(
$head
==
'total_bases_utils'
)
or
(
$head
==
'total_bases_useful_data'
)
}
<th
id=
"sample_
{
$i
}
_col_
{
$col_id
}
"
>
{($sample_results.$head)|number_format:0:',':' '}
</th>
<th
id=
"sample_
{
$i
}
_col_
{
$col_id
}
"
>
{($sample_results.$head)|number_format:0:',':' '}
({($sample_results.$head / $basic.total_bases*100)|number_format:2:',':' '}%)
</th>
{
elseif
(
$head
==
'N50_read_length_useful_data'
)
}
<th
id=
"sample_
{
$i
}
_col_
{
$col_id
}
"
>
{($sample_results.$head)|number_format:0:',':' '}
</th>
{/
if
}
...
...
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