From a14b59a93bf4979614d0e46c5fbd933566b50169 Mon Sep 17 00:00:00 2001
From: gsalin <gerald.salin@inrae.fr>
Date: Thu, 2 May 2024 09:22:37 +0200
Subject: [PATCH] gzip sequencing_summary file
---
workflows/ont_qc/components/run_stats.py | 2 +-
1 file changed, 1 insertion(+), 1 deletion(-)
diff --git a/workflows/ont_qc/components/run_stats.py b/workflows/ont_qc/components/run_stats.py
index a0a567da8..7a5993b01 100644
--- a/workflows/ont_qc/components/run_stats.py
+++ b/workflows/ont_qc/components/run_stats.py
@@ -126,7 +126,7 @@ class Run_stats (Analysis):
self._add_result_element("metrics", "Sample_name",self.sample_name,"analyse_info")
group = "Stats"
- self._add_result_element(sample, "sequencing_summary", self._save_file(self.sequencing_summary_file, sample + ".sequencing_summary.txt"), group)
+ self._add_result_element(sample, "sequencing_summary", self._save_file(self.sequencing_summary_file, sample + ".sequencing_summary.txt", True), group)
#logging.getLogger("jflow").debug("Begin Nanoplot.post_process - sample "+file)
# stat file
--
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