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Commit 17c09807 authored by Jerome Mariette's avatar Jerome Mariette
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first part for the statistics

parent 91a7757e
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ui/nG6/class.tx_nG6_eid.php
View file @ 17c09807
......@@ -689,6 +689,10 @@ class tx_nG6_eid {
}
}
print $res;
} elseif($type == 'project_repartition') {
$role = trim(t3lib_div::_GP('role'));
$by = trim(t3lib_div::_GP('by'));
print json_encode(tx_nG6_db::select_projects_repartition($role, $by));
}
}
......
ui/nG6/lib/class.tx_nG6_db.php
View file @ 17c09807
......@@ -174,6 +174,78 @@ class tx_nG6_db {
return $res_tab;
}
/**
* Select all project for the current user
*
* @param string $by by can group, organism, location
* @param string $role role can be create_user, manager
* @return table with all projects
*/
function select_projects_repartition($role, $by='title') {
if ($role == "create_user") {
$queryParts = array(
'SELECT' => 'tx_nG6_project.uid as pid, fe_groups.title as title, fe_groups.tx_nG6_organism as organism, fe_groups.tx_nG6_location as location',
'FROM' => 'tx_nG6_project '
.' INNER JOIN fe_users ON tx_nG6_project.cruser_id=fe_users.uid '
.' INNER JOIN fe_groups ON fe_groups.uid=fe_users.usergroup ',
'WHERE' => "",
'GROUPBY' => '',
'ORDERBY' => '',
'LIMIT' => ''
);
//$where = "tx_nG6_project.cruser_id="
} else if ($role == "manager") {
$queryParts = array(
'SELECT' => 'tx_nG6_project.uid as pid, fe_groups.title as title, fe_groups.tx_nG6_organism as organism, fe_groups.tx_nG6_location as location',
'FROM' => 'tx_nG6_project '
.' INNER JOIN fe_rights ON tx_nG6_project.uid=fe_rights.project_id '
.' INNER JOIN fe_users ON fe_rights.fe_user_id=fe_users.uid '
.' INNER JOIN fe_groups ON fe_groups.uid=fe_users.usergroup ',
'WHERE' => "fe_rights.right_id=1",
'GROUPBY' => '',
'ORDERBY' => '',
'LIMIT' => ''
);
}
$by_title = array() ;
$by_organism = array();
$by_location = array();
$res = $GLOBALS['TYPO3_DB']->exec_SELECT_queryArray($queryParts);
while($res_row = $GLOBALS['TYPO3_DB']->sql_fetch_assoc($res)) {
if (!isset ($by_title[$res_row['title']])) {
$by_title[$res_row['title']] = array(
'count' => 1,
'organism' => $row['organism'],
'location' => $row['location']);
} else {
$by_title[$res_row['title']]['count'] += 1;
}
if (!isset ($by_organism[$res_row['organism']])) {
$by_organism[$res_row['organism']] = array(
'count' => 1);
} else {
$by_organism[$res_row['organism']]['count'] += 1;
}
if (!isset ($by_location[$res_row['location']])) {
$by_location[$res_row['location']] = array(
'count' => 1);
} else {
$by_location[$res_row['location']]['count'] += 1;
}
}
if ($by=='title') {
return ($by_title);
} else if ($by=='organism') {
return ($by_organism);
} else if ($by=='location') {
return ($by_location);
}
}
/*
* Project functions
*------------------------------------------------------------*/
......
ui/nG6/pi6/accordion_graph.tpl deleted 100644 → 0
View file @ 91a7757e
{*
Copyright (C) 2009 INRA
This program is free software: you can redistribute it and/or modify
it under the terms of the GNU General Public License as published by
the Free Software Foundation, either version 3 of the License, or
(at your option) any later version.
This program is distributed in the hope that it will be useful,
but WITHOUT ANY WARRANTY; without even the implied warranty of
MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
GNU General Public License for more details.
You should have received a copy of the GNU General Public License
along with this program. If not, see <http://www.gnu.org/licenses/>.
*}
<div class="accordion" id="{$prefix}_stat_menu">
<div class="accordion-group">
<div class="accordion-heading">
<a class="accordion-toggle" data-toggle="collapse" data-parent="#{$prefix}_stat_menu" href="#{$prefix}_bygroup">
By group
</a>
</div>
<div id="{$prefix}_bygroup" class="accordion-body collapse in">
<div class="accordion-inner">
<table class="table table-striped table-bordered dataTable" id="{$prefix}_group_data_table">
<thead>
<th><center><input type="checkbox" id="{$prefix}_chk_all_group"></center></th>
<th>Group name</th>
<th>Organism</th>
<th>Location</th>
<th>Number of user in group</th>
</thead>
<tbody>
<td><center><input type="checkbox" id="{$prefix}_chk_group_" value="group_"></center></td>
<td></td>
<td></td>
<td></td>
<td></td>
</tbody>
</table>
<div id="{$prefix}_group_graph"> </div>
</div>
</div>
</div>
<div class="accordion-group">
<div class="accordion-heading">
<a class="accordion-toggle" data-toggle="collapse" data-parent="#{$prefix}_stat_menu" href="#{$prefix}_byorganism">
By organism
</a>
</div>
<div id="{$prefix}_byorganism" class="accordion-body collapse">
<div class="accordion-inner">
Anim pariatur cliche...
</div>
</div>
</div>
<div class="accordion-group">
<div class="accordion-heading">
<a class="accordion-toggle" data-toggle="collapse" data-parent="#{$prefix}_stat_menu" href="#{$prefix}_bylocation">
By location
</a>
</div>
<div id="{$prefix}_bylocation" class="accordion-body collapse">
<div class="accordion-inner">
Anim pariatur cliche...
</div>
</div>
</div>
<div class="accordion-group">
<div class="accordion-heading">
<a class="accordion-toggle" data-toggle="collapse" data-parent="#{$prefix}_stat_menu" href="#{$prefix}_bysequencer">
By sequencer
</a>
</div>
<div id="{$prefix}_bysequencer" class="accordion-body collapse">
<div class="accordion-inner">
Anim pariatur cliche...
</div>
</div>
</div>
</div>
\ No newline at end of file
ui/nG6/pi6/administration_view.tpl
View file @ 17c09807
......@@ -46,12 +46,13 @@ along with this program. If not, see <http://www.gnu.org/licenses/>.
<div class="tab-pane fade in active" id="wf_monitoring"></div>
<div class="tab-pane fade" id="project_stat">
{include file="accordion_graph.tpl" prefix="project"}
{include file="statistics_menu.tpl" prefix="project"}
<div id="project_graph"> </div>
</div>
<div class="tab-pane fade" id="data_stat">
{include file="accordion_graph.tpl" prefix="data"}
{include file="statistics_menu.tpl" prefix="data"}
<div id="data_graph"> </div>
<!--
<div id="size_chart"></div>
<div id="chart_options" class="form-inline">
......
ui/nG6/pi6/class.tx_nG6_pi6.php
View file @ 17c09807
......@@ -89,7 +89,8 @@ class tx_nG6_pi6 extends tslib_pibase {
$smarty->assign('group_list', $group_list);
$smarty->assign('data_folder', $this->conf["data"]);
$smarty->assign('server_url', $this->conf['server_url']);
$distribution = tx_nG6_db::select_projects_repartition('create_user', 'title');
$smarty->assign('distribution', $distribution);
return $smarty->fetch('administration_view.tpl');
}
}
......
ui/nG6/pi6/statistics_menu.tpl 0 → 100644
View file @ 17c09807
{*
Copyright (C) 2009 INRA
This program is free software: you can redistribute it and/or modify
it under the terms of the GNU General Public License as published by
the Free Software Foundation, either version 3 of the License, or
(at your option) any later version.
This program is distributed in the hope that it will be useful,
but WITHOUT ANY WARRANTY; without even the implied warranty of
MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
GNU General Public License for more details.
You should have received a copy of the GNU General Public License
along with this program. If not, see <http://www.gnu.org/licenses/>.
*}
<div class="accordion" id="{$prefix}_stat_menu">
<legend>1. Which users should be considered ?</legend>
<label class="radio">
<input type="radio" name="users_to_consider_{$prefix}" id="select_cruser_{$prefix}" value="create_user" checked>
users who have added data
</label>
<label class="radio">
<input type="radio" name="users_to_consider_{$prefix}" id="select_owner_{$prefix}" value="manager">
users for whom data were made ​​available
</label>
<br />
<legend>2. How should they be grouped ?</legend>
<label class="radio">
<input type="radio" name="group_by_{$prefix}" id="by_laboratories_{$prefix}" value="title" checked>
by laboratories
</label>
<label class="radio">
<input type="radio" name="group_by_{$prefix}" id="by_organization_{$prefix}" value="organism">
by organization
</label>
<label class="radio">
<input type="radio" name="group_by_{$prefix}" id="by_location_{$prefix}" value="location">
by location
</label>
<br />
<legend>3. Which <span id="by_span_{$prefix}">laboratories</span> should be displayed ? <small> non selected ones will be gathered in the "others" group </small></legend>
<table class="table table-striped table-bordered dataTable" id="data_table_{$prefix}">
<thead>
<th><center><input type="checkbox" id="{$prefix}_chk_all_group"></center></th>
<th>Group name</th>
<th>Organism</th>
<th>Location</th>
<th>Number of project</th>
</thead>
<tbody>
{foreach $distribution key=group_name item=group_values}
<tr>
<td><center><input type="checkbox" id="{$prefix}_chk_group_" value="group_"></center></td>
<td>{$group_name}</td>
<td>{$group_values.organism}</td>
<td>{$group_values.location}</td>
<td>{$group_values.count}</td>
</tr>
{/foreach}
</tbody>
</table>
<br />
<div class="row">
<div class="span2 offset9">
<div class="btn-group" data-toggle="buttons-radio">
<button type="button" id="distribution_{$prefix}" class="btn btn-primary"> <i class="icon-certificate icon-white"></i> distribution</button>
<button type="button" id="evolution_{$prefix}" class="btn"><i class="icon-random"></i> evolution</button>
</div>
</div>
</div>
</div>
\ No newline at end of file
ui/nG6/res/js/highstock.js
View file @ 17c09807
This source diff could not be displayed because it is too large. You can view the blob instead.
ui/nG6/res/js/tx_nG6_pi6.js
View file @ 17c09807
......@@ -26,7 +26,6 @@
* @author PF bioinformatique de Toulouse <>
*/
$(function () {
$('#myTab').tab();
......@@ -50,6 +49,117 @@ $(function () {
redraw_chart();
});
// statistics menu handling
$(':radio[id^=select_cruser_]').attr('checked','checked');
$(':radio[id^=by_laboratories_]').attr('checked','checked');
$(':radio[id^=distribution_]').attr('checked','checked');
$(":radio[id^=by_]").change(function(){
var prefix = $(this).attr("id").split("_")[2];
$("#by_span_"+prefix).html(($(this).val()));
refreshTable(prefix);
});
$(":radio[id^=select_]").change(function(){
var prefix = $(this).attr("id").split("_")[2];
refreshTable(prefix);
});
$("[id^=data_table_]").dataTable({
"aaSorting": [[ 1, "asc" ]],
"aoColumns": [
{ "bSortable": false },
null,
null,
null,
null]
});
Highcharts.getOptions().colors = Highcharts.map(Highcharts.getOptions().colors, function(color) {
return {
radialGradient: { cx: 0.5, cy: 0.3, r: 0.7 },
stops: [
[0, color],
[1, Highcharts.Color(color).brighten(-0.3).get('rgb')] // darken
]
};
});
$.ajax({
url: "index.php?eID=tx_nG6&type=project_repartition&role=create_user",
dataType: "json",
success: function(data) {
console.log(data);
$('#project_graph').highcharts({
chart: {
plotBackgroundColor: null,
plotBorderWidth: null,
plotShadow: false,
width: 930
},
tooltip: {
pointFormat: '{series.name}: <b>{point.percentage:.1f}%</b>'
},
plotOptions: {
pie: {
allowPointSelect: true,
cursor: 'pointer',
dataLabels: {
enabled: true,
color: '#000000',
connectorColor: '#000000',
formatter: function() {
return '<b>'+ this.point.name +'</b>: '+ this.percentage +' %';
}
}
}
},
series: [{
type: 'pie',
name: 'Browser share',
data: [
['Firefox', 45.0],
['IE', 26.8],
{
name: 'Chrome',
y: 12.8,
sliced: true,
selected: true
},
['Safari', 8.5],
['Opera', 6.2],
['Others', 0.7]
]
}]
});
}
});
// lock/unlock chart options fields when ajax request is sent
function lock_fields(lock){
if(lock==1){
......@@ -169,3 +279,19 @@ function initGroupTable () {
var groupTable = $('#group_data_table').dataTable();
return groupTable;
}
function refreshTable(kind) {
var role = $("[name=users_to_consider_"+kind+"]:checked").val();
var by = $("[name=group_by_"+kind+"]:checked").val();
if (kind == "project") {
$.ajax({
url: "index.php?eID=tx_nG6&type=project_repartition&role="+role+"&by="+by,
dataType: 'json',
success: function(val, status, xhr) {
console.log(val);
}
});
}
}
\ No newline at end of file
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