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genotoul-bioinfo
ng6
Commits
17247d0b
Commit
17247d0b
authored
Aug 13, 2018
by
Gerald Salin
Browse files
#53
add test data to the ont_qc workflow
parent
256b2ced
Changes
21
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workflows/ont_qc/data/fast5_dir/run3/fast5/0/tete.fast5
0 → 100644
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17247d0b
titi
workflows/ont_qc/data/fast5_dir/run3/fast5/0/toto.fast5
0 → 100644
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17247d0b
toto
workflows/ont_qc/data/fast5_dir/run3/fast5/1/titi.fast5
0 → 100644
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titi
workflows/ont_qc/data/fast5_dir/run3/fast5/1/tutu.fast5
0 → 100644
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titi
workflows/ont_qc/data/fast5_dir/run3/fast5/2/tyto.fast5
0 → 100644
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titi
workflows/ont_qc/data/fast5_dir/run3/fast5/2/tyty.fast5
0 → 100644
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titi
workflows/ont_qc/data/fast5_dir/run_1/fast5/0/tete.fast5
0 → 100644
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titi
workflows/ont_qc/data/fast5_dir/run_1/fast5/0/toto.fast5
0 → 100644
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toto
workflows/ont_qc/data/fast5_dir/run_1/fast5/1/titi.fast5
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titi
workflows/ont_qc/data/fast5_dir/run_1/fast5/1/tutu.fast5
0 → 100644
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titi
workflows/ont_qc/data/fast5_dir/run_1/fast5/2/tyto.fast5
0 → 100644
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titi
workflows/ont_qc/data/fast5_dir/run_1/fast5/2/tyty.fast5
0 → 100644
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17247d0b
titi
workflows/ont_qc/data/fast5_dir/run_2/fast5/0/tete.fast5
0 → 100644
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17247d0b
titi
workflows/ont_qc/data/fast5_dir/run_2/fast5/0/toto.fast5
0 → 100644
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17247d0b
toto
workflows/ont_qc/data/fast5_dir/run_2/fast5/1/titi.fast5
0 → 100644
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17247d0b
titi
workflows/ont_qc/data/fast5_dir/run_2/fast5/1/tutu.fast5
0 → 100644
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17247d0b
titi
workflows/ont_qc/data/fast5_dir/run_2/fast5/2/tyto.fast5
0 → 100644
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17247d0b
titi
workflows/ont_qc/data/fast5_dir/run_2/fast5/2/tyty.fast5
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titi
workflows/ont_qc/data/ont_qc_barcoded.conf
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17247d0b
...
...
@@ -33,7 +33,7 @@ arabido
test
-
dev
--
summary
-
file
/
work
/
ng6
-
test
/
claire
/
test_
ont_qc
/
sequencing_summary_barcoded_test
.
txt
work
flows
/
ont_qc
/
data
/
sequencing_summary_barcoded_test
.
txt
--
barcoded
yes
--
nb
-
threads
...
...
@@ -41,10 +41,8 @@ yes
--
fileformat
fastq
--
fast5dir
/
work
/
ng6
-
test
/
claire
/
test_
ont_qc
/
fast5_dir
work
flows
/
ont_qc
/
data
/
fast5_dir
--
sample
sample
-
name
=
ONT_sample
#read1=/MinION/20170308_arab1D_LSK108_MN19767/20170308_arab1D_LSK108_MN19767_albacorev1.2.4/20170308_arab1D_LSK108_MN19767_albacorev1.2.4.fastq
read1
=/
work
/
ng6
-
test
/
claire
/
test_ont_qc
/
test
*.
fastq
#
read2
=/
work
/
ng6
-
test
/
claire
/
test_ont_qc
/
test2
.
fastq
\ No newline at end of file
read1
=
workflows
/
ont_qc
/
data
/
test
*.
fastq
workflows/ont_qc/data/sequencing_summary_barcoded_test.txt
0 → 100644
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17247d0b
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