Commit 05fc6517 authored by Gerald Salin's avatar Gerald Salin
Browse files

Update insertssizes.py

parent 87e44a8c
......@@ -138,6 +138,7 @@ class InsertsSizes (Analysis):
self._create_and_archive(self.info_files, self.archive_name)
def get_version(self):
xmx ="-Xmx1g"
cmd = self.get_exec_path("javaPICARD")+" " + xmx +" -jar {} CollectInsertSizeMetrics --version".format(self.get_exec_path("Picard"))
p = Popen(cmd, stdout=PIPE, stderr=PIPE, shell=True)
stdout, stderr = p.communicate()
......
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