Commits · master · genotoul-bioinfo / miniannotator

19 Sep, 2018 1 commit
- turned all deletion longer than 9 bases in introns and filtered bam with -q 2 · d0cbe4a4
  Christophe Klopp authored Sep 19, 2018
  
  d0cbe4a4
05 Sep, 2018 2 commits
- add new parameter to set source string value in gtf and gff second column to ease file merging · 0f83d035
  Christophe Klopp authored Sep 05, 2018
  
  0f83d035
- add semicolon to gtf format and new gff output file · 4171d11b
  Christophe Klopp authored Sep 05, 2018
  
  4171d11b
22 Aug, 2018 2 commits
- Add summary for excluded matches · c211be8c
  Floreal Cabanettes authored Aug 22, 2018
  
  c211be8c
- Fill docstrings · 632e3490
  Floreal Cabanettes authored Aug 22, 2018
  
  632e3490
21 Aug, 2018 2 commits
- Rename fixreference.py fixcontigs.py · 094ee5e4
  Floreal Cabanettes authored Aug 21, 2018
  
  094ee5e4
- Fix fix of contigs + new orf sequence build · 60e89176
  Floreal Cabanettes authored Aug 21, 2018
  
  60e89176
08 Aug, 2018 1 commit
- A lot of works, not working for contigs fix · e6f253ea
  Floreal Cabanettes authored Aug 08, 2018
  
  e6f253ea
03 Aug, 2018 1 commit
- Start working on fixreference script · 55115024
  Floreal Cabanettes authored Aug 03, 2018
  
  55115024
26 Jul, 2018 1 commit
- Make exon ID unique by gene, not by transcript · 0544eb2e
  Floreal Cabanettes authored Jul 26, 2018
  
  0544eb2e
25 Jul, 2018 1 commit
- Add transcripts + exon ID + indel exon association · 392c7ce0
  Floreal Cabanettes authored Jul 25, 2018
  
  392c7ce0
23 Jul, 2018 4 commits
- Check input parameters · b7badedd
  Floreal Cabanettes authored Jul 23, 2018
  
  b7badedd
- Add How to install to the README · 5e5e81d0
  Floreal Cabanettes authored Jul 23, 2018
  
  5e5e81d0
- Add README and LICENCE + requirements file · 87bf8bea
  Floreal Cabanettes authored Jul 23, 2018
  
  87bf8bea
- Add writing of output GTF file · a40f987f
  Floreal Cabanettes authored Jul 23, 2018
  
  a40f987f
20 Jul, 2018 1 commit
- Initial commit · 14b056db
  Floreal Cabanettes authored Jul 20, 2018
  
  14b056db