Commit dc68aa4d authored by Jean Mainguy's avatar Jean Mainguy
Browse files

Add labels param in mataquast to have correct sample name in final multiqc

issue #176
parent 07ae5cf7
Pipeline #61356 skipped with stage
......@@ -24,6 +24,6 @@ process QUAST {
"""
mkdir -p $outdirModule/${sampleId}/
touch $outdirModule/${sampleId}/report.tsv
metaquast.py --threads ${task.cpus} --rna-finding --max-ref-number 0 --min-contig 0 ${assembly} -o $outdirModule/${sampleId}
metaquast.py --threads ${task.cpus} --rna-finding --max-ref-number 0 --min-contig 0 ${assembly} -o $outdirModule/${sampleId} --labels ${sampleId}
"""
}
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