Commit bd33d105 authored by Jean Mainguy's avatar Jean Mainguy
Browse files

add local executor for tiny process to test conf to reduce pending time in slurm

parent dc68aa4d
Pipeline #61495 skipped with stage
...@@ -18,6 +18,7 @@ process { ...@@ -18,6 +18,7 @@ process {
memory = { 2.GB * task.attempt } memory = { 2.GB * task.attempt }
} }
withName: MULTIQC { withName: MULTIQC {
executor = "local"
memory = { 2.GB * task.attempt } memory = { 2.GB * task.attempt }
} }
withName: HOST_FILTER { withName: HOST_FILTER {
...@@ -64,6 +65,7 @@ process { ...@@ -64,6 +65,7 @@ process {
memory = { 10.GB * task.attempt } memory = { 10.GB * task.attempt }
} }
withName: GET_SOFTWARE_VERSIONS { withName: GET_SOFTWARE_VERSIONS {
executor = "local"
memory = { 1.GB * task.attempt } memory = { 1.GB * task.attempt }
} }
withName: EGGNOG_MAPPER_DB { withName: EGGNOG_MAPPER_DB {
...@@ -94,5 +96,18 @@ process { ...@@ -94,5 +96,18 @@ process {
memory = { 30.GB * task.attempt } memory = { 30.GB * task.attempt }
cpus = 20 cpus = 20
} }
withLabel: MERGE_KAIJU {
memory = { 1.GB * task.attempt }
cpus = 1
executor = "local"
}
withLabel: KAIJU_TO_KRONA {
memory = { 1.GB * task.attempt }
cpus = 1
executor = "local"
}
withLabel: QUANTIFICATION {
memory = { 1.GB * task.attempt }
executor = "local"
}
} }
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