Skip to content
GitLab
Menu
Projects
Groups
Snippets
Help
Help
Support
Community forum
Keyboard shortcuts
?
Submit feedback
Contribute to GitLab
Sign in
Toggle navigation
Menu
Open sidebar
genotoul-bioinfo
metagWGS
Commits
bd33d105
Commit
bd33d105
authored
Jun 17, 2022
by
Jean Mainguy
Browse files
add local executor for tiny process to test conf to reduce pending time in slurm
parent
dc68aa4d
Pipeline
#61495
skipped with stage
Changes
1
Pipelines
1
Hide whitespace changes
Inline
Side-by-side
conf/test.config
View file @
bd33d105
...
...
@@ -18,6 +18,7 @@ process {
memory
= {
2
.
GB
*
task
.
attempt
}
}
withName
:
MULTIQC
{
executor
=
"local"
memory
= {
2
.
GB
*
task
.
attempt
}
}
withName
:
HOST_FILTER
{
...
...
@@ -64,6 +65,7 @@ process {
memory
= {
10
.
GB
*
task
.
attempt
}
}
withName
:
GET_SOFTWARE_VERSIONS
{
executor
=
"local"
memory
= {
1
.
GB
*
task
.
attempt
}
}
withName
:
EGGNOG_MAPPER_DB
{
...
...
@@ -94,5 +96,18 @@ process {
memory
= {
30
.
GB
*
task
.
attempt
}
cpus
=
20
}
withLabel
:
MERGE_KAIJU
{
memory
= {
1
.
GB
*
task
.
attempt
}
cpus
=
1
executor
=
"local"
}
withLabel
:
KAIJU_TO_KRONA
{
memory
= {
1
.
GB
*
task
.
attempt
}
cpus
=
1
executor
=
"local"
}
withLabel
:
QUANTIFICATION
{
memory
= {
1
.
GB
*
task
.
attempt
}
executor
=
"local"
}
}
Write
Preview
Markdown
is supported
0%
Try again
or
attach a new file
.
Attach a file
Cancel
You are about to add
0
people
to the discussion. Proceed with caution.
Finish editing this message first!
Cancel
Please
register
or
sign in
to comment