Commit 2c4a0d1a authored by Claire Hoede's avatar Claire Hoede
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Update usage.md: formatting of check your config

parent 81a693c7
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......@@ -337,9 +337,8 @@ For example check the version of software in the yaml file and the singularity r
#### Check your configuration and parameters
Because it has many levels of configuration we advise you to check your configuration using the following command:
For example:
`module load bioinfo/nfcore-Nextflow-v21.10.6
module load system/singularity-3.7.3
nextflow config -profile genotoul ~/work/metagWGSNewVersion/metagwgs/main.nf` will output all the configuration that will be used by the workflow
```module load bioinfo/nfcore-Nextflow-v21.10.6; module load system/singularity-3.7.3; nextflow config -profile genotoul ~/work/metagWGSNewVersion/metagwgs/main.nf```
will output all the configuration that will be used by the workflow
## V. Description of output files
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