Commit 16c765f7 authored by MARTIN Pierre's avatar MARTIN Pierre
Browse files

Merge branch 'dev-test' of forgemia.inra.fr:genotoul-bioinfo/metagwgs into dev-test

parents 7b26f1fa aef0cffa
......@@ -69,8 +69,8 @@ Three files (`metagwgs.sif`, `eggnog_mapper.sif` and `mosdepth.sif`) must have b
* [eggnog_mapper recipe file](https://forgemia.inra.fr/genotoul-bioinfo/metagwgs/-/blob/dev/env/Singularity_recipe_eggnog_mapper)
* [eggnog_mapper.yml](https://forgemia.inra.fr/genotoul-bioinfo/metagwgs/-/blob/dev/env/eggnog_mapper.yml)
* mosdepth.sif container
* [mosdepth recipe file] https://forgemia.inra.fr/genotoul-bioinfo/metagwgs/-/blob/dev/env/Singularity_recipe_mosdepth
* [mosdepth.yml] https://forgemia.inra.fr/genotoul-bioinfo/metagwgs/-/blob/dev/env/mosdepth.yml
* [mosdepth recipe file](https://forgemia.inra.fr/genotoul-bioinfo/metagwgs/-/blob/dev/env/Singularity_recipe_mosdepth)
* [mosdepth.yml](https://forgemia.inra.fr/genotoul-bioinfo/metagwgs/-/blob/dev/env/mosdepth.yml)
At the end of the build, three files (`metagwgs.sif`, `eggnog_mapper.sif` and `mosdepth.sif`) must have been generated.
......
......@@ -2,7 +2,7 @@
## I. Basic usage
1. See [Installation page](https://forgemia.inra.fr/genotoul-bioinfo/metagwgs/-/blob/dev/docs/installation.md) to install metagWGS. Make sure you are in the directory where you downloaded `metagwgs` source files and added into `metagwgs/dev` the two Singularity images `metagwgs.sif` and `eggnog_mapper.sif`.
1. See [Installation page](https://forgemia.inra.fr/genotoul-bioinfo/metagwgs/-/blob/dev/docs/installation.md) to install metagWGS. Make sure you are in the directory where you downloaded `metagwgs` source files and added into `metagwgs/env` the two Singularity images `metagwgs.sif` and `eggnog_mapper.sif`.
2. metagWGS is still under development: you need to use the `dev` branch of the metagwgs repository.
......
Markdown is supported
0% or .
You are about to add 0 people to the discussion. Proceed with caution.
Finish editing this message first!
Please register or to comment