Commit 1687488b authored by Joanna Fourquet's avatar Joanna Fourquet
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Update usage.md

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`Script.sh` is a basic script that requires only small test data input (available into [`metagwgs/test`](https://forgemia.inra.fr/genotoul-bioinfo/metagwgs/-/tree/dev/test)) and no other files. To analyze real data, in addition to your metagenomic whole genome shotgun `.fastq` files, you need to download different files which are described into the next chapter.
> **WARNING:** if you run metagWGS to **analyze real metagenomics data on genologin cluster**, you have to use the `unlimitq` queue to run your Nextflow script: instead of writing in the second line of your script `#SBATCH -p workq` you need to write `#SBATCH -p unlimitq`.
> **WARNING:** if you run metagWGS to **analyze real metagenomics data on genologin cluster**, you have to use the `unlimitq` queue to run your Nextflow script. To do this, instead of writing in the second line of your script `#SBATCH -p workq` you need to write `#SBATCH -p unlimitq`.
## II. Input files
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