Commit 039f85ac authored by Celine Noirot's avatar Celine Noirot
Browse files

Update .gitlab-ci.yml

parent 7a272f39
Pipeline #21828 failed with stages
in 38 seconds
image: nextflow/nextflow
push:
script:
- nextflow run ./main.nf --help
# recipe for building singularity image and deploy it on the registery for bwa version 0.7.17
image:
name: quay.io/singularity/singularity:v3.4.0
entrypoint: [""]
stages:
- build
- deploy
# Build Singularity container bwa_v0.7.17.sif
singularity-image:
stage: build
script:
- singularity build metagWGS.sif env/Singularity_recipe_metagWGS_dependancies
artifacts:
paths:
- metagWGS.sif
# Push the image template.sif on the registry
deploy:
stage: deploy
script:
- singularity push --docker-username "${CI_REGISTRY_USER}" --docker-password "${CI_REGISTRY_PASSWORD}" metagWGS.sif oras://"$CI_REGISTRY_IMAGE"/"$CI_PROJECT_NAME":"$CI_COMMIT_TAG"
Markdown is supported
0% or .
You are about to add 0 people to the discussion. Proceed with caution.
Finish editing this message first!
Please register or to comment