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src/jflow/component.py

@@ -177,7 +177,7 @@ class Component(object):
             self.params_order.append(name)
             self.__setattr__(name, new_param)
 
-    def add_output_file_endswith(self, name, help, file_format="any", pattern='.stderr', behaviour="include",
+    def add_output_file_endswith(self, name, help, pattern, file_format="any", behaviour="include",
                                group="default", display_name=None, add_to=None):
         new_param = OutputFilesEndsWith(name, help, self.output_directory, pattern, include=(behaviour == "include"), 
                                        file_format=file_format, group=group, display_name=display_name)
@@ -192,7 +192,7 @@ class Component(object):
             self.params_order.append(name)
             self.__setattr__(name, new_param)
 
-    def add_output_file_pattern(self, name, help, file_format="any", pattern='.stderr$', behaviour="include",
+    def add_output_file_pattern(self, name, help, pattern, file_format="any", behaviour="include",
                                group="default", display_name=None, add_to=None):
         new_param = OutputFilesPattern(name, help, self.output_directory, pattern, include=(behaviour == "exclude"), 
                                        file_format=file_format, group=group, display_name=display_name)