Commit 84f1e5b7 authored by Jerome Mariette's avatar Jerome Mariette
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sort citation by alphabet order

parent 26939811
......@@ -187,47 +187,47 @@ on a 5 000 cores HPC.
\begin{thebibliography}{}
\bibitem[Albrecht {\it et~al}., 2012]{Albrecht} Albrecht M, et al. (2012)
Makeflow: A Portable Abstraction for Data Intensive Computing on Clusters,
Clouds, and Grids. {\it SWEET at ACM SIGMOD}, {\bf20}.
\bibitem[Bui, 2012]{Bui} Bui P, (2012) Compiler Toolchain For Data Intensive
Scientific Workflows. {\it Ph.D. Thesis, University of Notre Dame}.
\bibitem[Gafni {\it et~al}., 2014]{Gafni} Gafni E, et al. (2014) COSMOS: Python
library for massively parallel workflows. {\it Bioinformatics}, {\bf30},
2956-2958.
\bibitem[Goecks {\it et~al}., 2010]{Goecks} Goecks J, et al. (2010) Galaxy: a
comprehensive approach for supporting accessible, reproducible, and transparent
computational research in the life sciences, {\it Genome Biology}, {\bf 11},
R86.
\bibitem[Meyer {\it et~al}., 2008]{Meyer} Meyer F, et al. (2008) The
metagenomics RAST server – a public resource for the automatic phylogenetic and
functional analysis of metagenomes, {\it BMC Bioinformatics}, {\bf 9:386}.
\bibitem[Roux {\it et~al}., 2011]{Roux} Roux S, et al. (2011) Metavir: a web
server dedicated to virome analysis, {\it Bioinformatics}, {\bf 21}, 3074-3075.
\bibitem[Neron {\it et~al}., 2002]{Neron} Neron B, et al. (2009) BioMOBY: an
open source biological web services proposal. {\it Bioinformatics}, {\bf25},
3005-3011.
\bibitem[Mariette {\it et~al}., 2014]{Mariette} Mariette J, et al. (2014)
RNAbrowse: RNA-Seq De Novo Assembly Results Browser. {\it PLoS ONE}, 9(5).
\bibitem[Lopes {\it et~al}., 2010]{Lopes} Lopes C, et al. (2010) Cytoscape Web:
an interactive web-based network browser, {\it Bioinformatics}, {\bf 26},
2347-2348.
\bibitem[Mariette {\it et~al}., 2012]{Mariette} Mariette J, et al. (2012)
NG6: Integrated next generation sequencing storage and processing environment.
{\it BMC Genomics}, 13:462.
\bibitem[Gafni {\it et~al}., 2014]{Gafni} Gafni E, et al. (2014) COSMOS: Python
library for massively parallel workflows. {\it Bioinformatics}, {\bf30},
2956-2958.
\bibitem[Albrecht {\it et~al}., 2012]{Albrecht} Albrecht M, et al. (2012)
Makeflow: A Portable Abstraction for Data Intensive Computing on Clusters,
Clouds, and Grids. {\it SWEET at ACM SIGMOD}, {\bf20}.
\bibitem[Mariette {\it et~al}., 2014]{Mariette} Mariette J, et al. (2014)
RNAbrowse: RNA-Seq De Novo Assembly Results Browser. {\it PLoS ONE}, 9(5).
\bibitem[Bui, 2012]{Bui} Bui P, (2012) Compiler Toolchain For Data Intensive
Scientific Workflows. {\it Ph.D. Thesis, University of Notre Dame}.
\bibitem[Meyer {\it et~al}., 2008]{Meyer} Meyer F, et al. (2008) The
metagenomics RAST server – a public resource for the automatic phylogenetic and
functional analysis of metagenomes, {\it BMC Bioinformatics}, {\bf 9:386}.
\bibitem[Lopes {\it et~al}., 2010]{Lopes} Lopes C, et al. (2010) Cytoscape Web:
an interactive web-based network browser, {\it Bioinformatics}, {\bf 26},
2347-2348.
\bibitem[Neron {\it et~al}., 2002]{Neron} Neron B, et al. (2009) BioMOBY: an
open source biological web services proposal. {\it Bioinformatics}, {\bf25},
3005-3011.
\bibitem[Orvis {\it et~al}., 2010] Orvis J, et al. (2010) Ergatis: A web
interface and scalable software system for bioinformatics workflows. {\it
Bioinformatics}, 15;26(12).
\bibitem[Roux {\it et~al}., 2011]{Roux} Roux S, et al. (2011) Metavir: a web
server dedicated to virome analysis, {\it Bioinformatics}, {\bf 21}, 3074-3075.
\end{thebibliography}
\end{document}
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