Commit 44094667 authored by Jerome Mariette's avatar Jerome Mariette
Browse files

answer to reviewer 1 ok

parent 26cd63cf
......@@ -52,20 +52,18 @@ and execute their computational pipelines.
Generic WMS, such as Galaxy (Goecks et al., 2010), Ergatis (Orvis et al., 2010)
or Mobyle (Wilkinson et al., 2009) provide a user friendly graphical interface
easing workflow creation and execution. Today, Galaxy is probably the most used
WMS in the biologist community thanks to its intuitiveness and large software
package collection. Unfortunately, such environments come with their own
interface, complicating their integration within already existing web tools.
Other WMS such as weaver (Bui et al., 2012), Snakemake (Koster et al., 2012),
Ruffus (Goodstadt, 2010) or Cosmos (Gafni et al., 2014) provide a framework or a
domain-specific language to developers wanting to build and run workflows. These
software packages offer the flexibility and power of a high level programming
language, but they do not provide a user interface, enable component and
workflow definition or check file formats.
To our knowledge, Jflow, presented in this article, is the only WMS designed to
be embedded in any web application, thanks to its organization as jQuery
(http://jquery.com/) plug-ins.
easing workflow creation and execution. Unfortunately, such environments come
with their own interface, complicating their integration within already existing
web tools. Other WMS such as weaver (Bui et al., 2012), Snakemake (Koster et
al., 2012), Ruffus (Goodstadt, 2010) or Cosmos (Gafni et al., 2014) provide a
framework or a domain-specific language to developers wanting to build and run
workflows. These software packages offer the flexibility and power of a high
level programming language, but they do not provide a user interface, enable
component and workflow definition.
JFlow combines a user friendly interface with and intuitive python API. It
is, to our knowledge, the only WMS designed to be embedded in any web application,
thanks to its organization as jQuery (http://jquery.com/) plug-ins.
\section{Methods}
......
......@@ -73,7 +73,8 @@ If so, say that clearly. If not, take care to make a parallel construction in
each sentence, so that the third statement is a clear reaction to the first
two.}
The introduction has been partialy rewritten taking into account reviewer
recommendations.
\textbf{Reviewer: 2}
......
Supports Markdown
0% or .
You are about to add 0 people to the discussion. Proceed with caution.
Finish editing this message first!
Please register or to comment