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/*!
* Bootstrap v3.2.0 (http://getbootstrap.com)
* Copyright 2011-2014 Twitter, Inc.
* Licensed under MIT (https://github.com/twbs/bootstrap/blob/master/LICENSE)
*/.btn-default,.btn-primary,.btn-success,.btn-info,.btn-warning,.btn-danger{text-shadow:0 -1px 0 rgba(0,0,0,.2);-webkit-box-shadow:inset 0 1px 0 rgba(255,255,255,.15),0 1px 1px rgba(0,0,0,.075);box-shadow:inset 0 1px 0 rgba(255,255,255,.15),0 1px 1px rgba(0,0,0,.075)}.btn-default:active,.btn-primary:active,.btn-success:active,.btn-info:active,.btn-warning:active,.btn-danger:active,.btn-default.active,.btn-primary.active,.btn-success.active,.btn-info.active,.btn-warning.active,.btn-danger.active{-webkit-box-shadow:inset 0 3px 5px rgba(0,0,0,.125);box-shadow:inset 0 3px 5px rgba(0,0,0,.125)}.btn:active,.btn.active{background-image:none}.btn-default{text-shadow:0 1px 0 #fff;background-image:-webkit-linear-gradient(top,#fff 0,#e0e0e0 100%);background-image:-o-linear-gradient(top,#fff 0,#e0e0e0 100%);background-image:-webkit-gradient(linear,left top,left bottom,from(#fff),to(#e0e0e0));background-image:linear-gradient(to bottom,#fff 0,#e0e0e0 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body {
padding-top: 70px;
padding-bottom: 30px;
}
.theme-dropdown .dropdown-menu {
position: static;
display: block;
margin-bottom: 20px;
}
.theme-showcase > p > .btn {
margin: 5px 0;
}
.theme-showcase .navbar .container {
width: auto;
}
/*
* Style tweaks
* --------------------------------------------------
*/
html,
body {
overflow-x: hidden; /* Prevent scroll on narrow devices */
}
body {
padding-top: 70px;
}
footer {
padding: 30px 0;
}
/*
* Off Canvas
* --------------------------------------------------
*/
@media screen and (max-width: 767px) {
.row-offcanvas {
position: relative;
-webkit-transition: all .25s ease-out;
-o-transition: all .25s ease-out;
transition: all .25s ease-out;
}
.row-offcanvas-right {
right: 0;
}
.row-offcanvas-left {
left: 0;
}
.row-offcanvas-right
.sidebar-offcanvas {
right: -50%; /* 6 columns */
}
.row-offcanvas-left
.sidebar-offcanvas {
left: -50%; /* 6 columns */
}
.row-offcanvas-right.active {
right: 50%; /* 6 columns */
}
.row-offcanvas-left.active {
left: 50%; /* 6 columns */
}
.sidebar-offcanvas {
position: absolute;
top: 0;
width: 50%; /* 6 columns */
}
}
docs/example1.html
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docs/example2.html
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<!DOCTYPE html>
<html lang="en">
<head>
<meta charset="utf-8">
<title>Jflow</title>
<head>
<meta charset="utf-8">
<meta name="viewport" content="width=device-width, initial-scale=1">
<meta name="description" content="">
<!-- Le styles -->
<link href="css/bootstrap.css" rel="stylesheet">
<style type="text/css">
body {
padding-top: 60px;
padding-bottom: 40px;
}
</style>
<link href="css/ladda-themeless.min.css" rel="stylesheet">
<link href="css/bootstrap-responsive.css" rel="stylesheet">
<link href="../src/js/datepicker.css" rel="stylesheet">
<link href="../src/js/jflow.css" rel="stylesheet">
<link rel="shortcut icon" href="../assets/ico/favicon.png">
<link href="css/docs.css" rel="stylesheet">
<link href="css/prettify.css" rel="stylesheet">
</head>
<title>Jflow</title>
<body data-spy="scroll" data-target=".bs-docs-sidebar">
<div class="navbar navbar-inverse navbar-fixed-top">
<div class="navbar-inner">
<div class="container">
<button type="button" class="btn btn-navbar" data-toggle="collapse" data-target=".nav-collapse">
<span class="icon-bar"></span>
<span class="icon-bar"></span>
<span class="icon-bar"></span>
</button>
<a class="brand" href="#">Jflow</a>
<div class="nav-collapse collapse">
<ul class="nav">
<li><a href="./index.html">About</a></li>
<li><a href="./jflow-install.html">Install</a></li>
<li class="dropdown">
<a class="dropdown-toggle" data-toggle="dropdown" href="#">
Core
<b class="caret"></b>
</a>
<ul class="dropdown-menu">
<li> <a href="./jflow-core.html">Jflow overview</a> </li>
<li> <a href="./jflow-core-component.html">Adding component</a> </li>
<li> <a href="./jflow-core-workflow.html">Adding workflow</a> </li>
</ul>
</li>
<li><a href="./jflow-plugin.html">JS Plugin</a></li>
<li><a href="./example1.html">Example 1</a></li>
<li class="active"><a href="./example2.html">Example 2</a></li>
<li><a target="_blank" href="https://mulcyber.toulouse.inra.fr/plugins/mediawiki/wiki/jflow/index.php/Accueil">Sources</a></li>
<li><a href="mailto:support.genopole@toulouse.inra.fr">Contact</a></li>
</ul>
</div><!--/.nav-collapse -->
</div>
</div>
</div>
<div class="container">
<div class="row">
<div class="span3 bs-docs-sidebar">
<ul id="ul-active" class="nav nav-list bs-docs-sidenav affix-top">
<center><li class="nav-header bs-docs-sidebar">Active workflows</li></center>
<li><a id="active-workflows"><i class="icon-chevron-right"></i> List of the active workflows</a></li>
</ul>
</div>
<div class="span9">
<section id="current-workflow">
<div id="current-header" class="page-header">
<h1>Actives workflows <small>to monitor</small></h1>
</div>
<div id="current-body">
<div id="active-workflows-list"></div>
</div>
<div id="current-footer">
</div>
</section>
</div>
</div>
<div class="row">
<div class="span3 bs-docs-sidebar" style="top: 120px;position: absolute;">
<ul id="ul-available" class="nav nav-list bs-docs-sidenav affix-top">
</ul>
</div>
</div>
</div> <!-- /container -->
<!-- Bootstrap core CSS -->
<link href="css/bootstrap.min.css" rel="stylesheet">
<!-- Bootstrap theme -->
<link href="css/bootstrap-theme.min.css" rel="stylesheet">
<!-- Custom styles for this template -->
<link href="css/theme.css" rel="stylesheet">
<!-- jflow css -->
<link href="css/ladda-themeless.min.css" rel="stylesheet">
<link href="../src/js/datepicker.css" rel="stylesheet">
<link href="../src/js/jflow.css" rel="stylesheet">
<!-- HTML5 shim and Respond.js IE8 support of HTML5 elements and media queries -->
<!--[if lt IE 9]>
<script src="https://oss.maxcdn.com/html5shiv/3.7.2/html5shiv.min.js"></script>
<script src="https://oss.maxcdn.com/respond/1.4.2/respond.min.js"></script>
<![endif]-->
</head>
<!-- Footer -->
<footer class="footer">
<div class="container">
<p>Copyright © 2014, INRA | Designed by GenoToul Bioinfo and Sigenae teams.</p>
<ul class="footer-links">
<li><a href="http://bioinfo.genotoul.fr/" target="_blank">GenoToul Bioinfo platform</a></li>
<li class="muted">&middot;</li>
<li><a href="http://www.sigenae.org/" target="_blank">Sigenae platform</a></li>
<li class="muted">&middot;</li>
<li><a href="http://www.international.inra.fr/" target="_blank">INRA</a></li>
</ul>
</div>
</footer>
<body role="document">
<!-- Le javascript
================================================== -->
<!-- Placed at the end of the document so the pages load faster -->
<script type="text/javascript" src="js/jquery.min.js"></script>
<script src="js/spin.min.js" type="text/javascript"></script>
<script src="js/ladda.min.js" type="text/javascript"></script>
<script src="js/bootstrap.min.js"></script>
<script src="js/prettify.js"></script>
<!-- Fixed navbar -->
<div class="navbar navbar-inverse navbar-fixed-top" role="navigation">
<div class="container">
<div class="navbar-header">
<button type="button" class="navbar-toggle collapsed" data-toggle="collapse" data-target=".navbar-collapse">
<span class="sr-only">Toggle navigation</span>
<span class="icon-bar"></span>
<span class="icon-bar"></span>
<span class="icon-bar"></span>
</button>
<a class="navbar-brand" href="#">Jflow</a>
</div>
<div class="navbar-collapse collapse">
<ul class="nav navbar-nav">
<li><a href="./index.html">About</a></li>
<li><a href="./jflow-install.html">Install</a></li>
<li class="dropdown">
<a href="#" class="dropdown-toggle" data-toggle="dropdown">Core <span class="caret"></span></a>
<ul class="dropdown-menu" role="menu">
<li><a href="./jflow-core.html">Jflow overview</a></li>
<li><a href="./jflow-core-component.html">Adding component</a></li>
<li><a href="./jflow-core-workflow.html">Adding workflow</a></li>
</ul>
</li>
<li><a href="./jflow-plugin.html">JS Plugin</a></li>
<li><a href="./example1.html">Example 1</a></li>
<li class="active"><a href="./example2.html">Example 2</a></li>
<li><a target="_blank" href="https://mulcyber.toulouse.inra.fr/plugins/mediawiki/wiki/jflow/index.php/Accueil">Sources</a></li>
<li><a href="mailto:support.genopole@toulouse.inra.fr">Contact</a></li>
</ul>
</div><!--/.nav-collapse -->
</div>
</div>
<div class="container theme-showcase" role="main">
<p>TODO</p>
<hr>
<footer>
<div class="container" style="text-align: center;">
<p>Copyright © 2014, INRA | Designed by <a target="_blank" href="http://bioinfo.genotoul.fr/">GenoToul Bioinfo platform</a> and <a target="_blank" href="http://www.sigenae.org/">Sigenae platform</a>.</p>
</div>
</footer>
<script src='../src/js/jquery.tmpl.min.js' type='text/javascript'></script>
<script src='../src/js/jquery.validate.js' type='text/javascript'></script>
<script src="../src/js/jquery.ui.widget.js"></script>
<script src="../src/js/jquery.iframe-transport.js"></script>
<script src="../src/js/jquery.fileupload.js"></script>
<script src="../src/js/jquery.fileupload-process.js"></script>
<script src="../src/js/jquery.fileupload-validate.js"></script>
<script src='../src/js/cytoscape.min.js' type='text/javascript'></script>
</div> <!-- /container -->
<script src='../src/js/jflow-activewf.js' type='text/javascript'></script>
<script src='../src/js/jflow-availablewf.js' type='text/javascript'></script>
<script src='../src/js/jflow-wfform.js' type='text/javascript'></script>
<script src='../src/js/jflow-wfstatus.js' type='text/javascript'></script>
<script src="../src/js/bootstrap-datepicker.js"></script>
<!-- Bootstrap core JavaScript
================================================== -->
<!-- Placed at the end of the document so the pages load faster -->
<script src="js/jquery.min.js"></script>
<script src="js/spin.min.js" type="text/javascript"></script>
<script src="js/ladda.min.js" type="text/javascript"></script>
<script src="js/bootstrap.min.js"></script>
<script src='../src/js/jquery.tmpl.min.js' type='text/javascript'></script>
<script src='../src/js/jquery.validate.js' type='text/javascript'></script>
<script src="../src/js/jquery.ui.widget.js"></script>
<script src="../src/js/jquery.iframe-transport.js"></script>
<script src="../src/js/jquery.fileupload.js"></script>
<script src="../src/js/jquery.fileupload-process.js"></script>
<script src="../src/js/jquery.fileupload-validate.js"></script>
<script src='../src/js/cytoscape.js' type='text/javascript'></script>
<script src='../src/js/jflow-activewf.js' type='text/javascript'></script>
<script src='../src/js/jflow-availablewf.js' type='text/javascript'></script>
<script src='../src/js/jflow-wfoutputs.js' type='text/javascript'></script>
<script src='../src/js/jflow-wfform.js' type='text/javascript'></script>
<script src='../src/js/jflow-wfstatus.js' type='text/javascript'></script>
<script src="../src/js/bootstrap-datepicker.js"></script>
<script type='text/javascript'>
<script type='text/javascript'>
$(document).ready(function(){
/**
* Use the plugins
*/
$("#ul-available").availablewf({template: [
' <center><li class="nav-header bs-docs-sidebar">Available workflows</li></center>',
' {{each(index, workflow) workflows}}',
// if this workflow shouldnt be displayed
' {{if filters.indexOf(workflow.class) == -1 }}',
' <li><a id="availablewf_btn_${workflow.class}"><i class="icon-chevron-right"></i> ${workflow.name}</a></li>',
' {{/if}}',
' {{/each}}'].join('\n')
});
$("#ul-available").on('select.available', function(event, workflow) {
$('#current-header').html("<h1>" + workflow["name"] + " <small>" + workflow["help"] + "</small>");
$('#current-body').wfform({
workflowClass: workflow["class"],
displayRunButton: true,
displayResetButton: true
});
});
$("#active-workflows-list").activewf();
$("#ul-active").click(function() {
$('#current-header').html("<h1>Actives workflows <small>to monitor</small></h1>");
$('#current-body').activewf('reload');
});
$("#current-body").on('select.active', function(event, workflow) {
$('#current-header').html("<h1>" + workflow["name"] + " <small>" + workflow["id"] + "</small></h1>");
$('#current-body').wfstatus({
workflowID: workflow["id"]
});
$('#current-footer').html(
'<button id="refresh_workflow" class="btn"><i class="icon-refresh"></i> Refresh</button>' +
'<button id="rerun_workflow" class="btn btn-primary"><i class="icon-cog icon-white"></i> ReRun</button>');
});
});
</script>
$(document).ready(function(){ });
</script>
</body>
</html>
\ No newline at end of file
docs/fonts/glyphicons-halflings-regular.svg 0 → 100644
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This diff is collapsed.
docs/index.html
View file @ 397f3cb0
<!DOCTYPE html>
<html lang="en">
<head>
<meta charset="utf-8">
<title>Jflow</title>
<head>
<meta charset="utf-8">
<meta name="viewport" content="width=device-width, initial-scale=1">
<meta name="description" content="">
<!-- Le styles -->
<link href="css/bootstrap.css" rel="stylesheet">
<style type="text/css">
body {
padding-top: 60px;
padding-bottom: 40px;
}
</style>
<link href="css/bootstrap-responsive.css" rel="stylesheet">
<link href="../src/js/datepicker.css" rel="stylesheet">
<link href="../src/js/jflow.css" rel="stylesheet">
<link rel="shortcut icon" href="../assets/ico/favicon.png">
<link href="css/docs.css" rel="stylesheet">
<link href="js/google-code-prettify/prettify.css" rel="stylesheet">
</head>
<title>Jflow</title>
<body>
<div class="navbar navbar-inverse navbar-fixed-top">
<div class="navbar-inner">
<div class="container">
<button type="button" class="btn btn-navbar" data-toggle="collapse" data-target=".nav-collapse">
<span class="icon-bar"></span>
<span class="icon-bar"></span>
<span class="icon-bar"></span>
</button>
<a class="brand" href="#">Jflow</a>
<div class="nav-collapse collapse">
<ul class="nav">
<li class="active"><a href="./index.html">About</a></li>
<li><a href="./jflow-install.html">Install</a></li>
<li class="dropdown">
<a class="dropdown-toggle" data-toggle="dropdown" href="#">
Core
<b class="caret"></b>
</a>
<ul class="dropdown-menu">
<li> <a href="./jflow-core.html">Jflow overview</a> </li>
<li> <a href="./jflow-core-component.html">Adding component</a> </li>
<li> <a href="./jflow-core-workflow.html">Adding workflow</a> </li>
</ul>
</li>
<li><a href="./jflow-plugin.html">JS Plugin</a></li>
<li><a href="./example1.html">Example 1</a></li>
<li><a href="./example2.html">Example 2</a></li>
<li><a target="_blank" href="https://mulcyber.toulouse.inra.fr/plugins/mediawiki/wiki/jflow/index.php/Accueil">Sources</a></li>
<li><a href="mailto:support.genopole@toulouse.inra.fr">Contact</a></li>
</ul>
</div><!--/.nav-collapse -->
</div>
</div>
</div>
<!-- Bootstrap core CSS -->
<link href="css/bootstrap.min.css" rel="stylesheet">
<!-- Bootstrap theme -->
<link href="css/bootstrap-theme.min.css" rel="stylesheet">
<!-- Custom styles for this template -->
<link href="css/theme.css" rel="stylesheet">
<!-- HTML5 shim and Respond.js IE8 support of HTML5 elements and media queries -->
<!--[if lt IE 9]>
<script src="https://oss.maxcdn.com/html5shiv/3.7.2/html5shiv.min.js"></script>
<script src="https://oss.maxcdn.com/respond/1.4.2/respond.min.js"></script>
<![endif]-->
</head>
<!-- Subhead ================================================== -->
<header class="jumbotron subhead" id="overview">
<div class="container">
<h1>Jflow</h1>
<p class="lead">
A fully scalable workflow management system that can easily be embedded in any WEB site,
providing all workflow management systems features and benefits to your project.
</p>
</div>
</header>
<body role="document">
<div class="container">
<div class="marketing">
<p class="marketing-byline"></p>
<div class="row">
<div class="span4">
<h2>Customize jflow</h2>
<p>Learn how to insert the jflow plugin within your own application.</p>
<p><a class="btn" href="./jflow-plugin.html">more &raquo;</a></p>
</div>
<div class="span4">
<h2>Add new components</h2>
<p>Your workflow requires new component, learn how to add new ones.</p>
<p><a class="btn" href="./jflow-core-component.html">more &raquo;</a></p>
</div>
<div class="span4">
<h2>Add new workflows</h2>
<p>Learn how to add new workflows.</p>
<p><a class="btn" href="./jflow-core-workflow.html">more &raquo;</a></p>
</div>
</div>
</div>
</div> <!-- /container -->
<!-- Fixed navbar -->
<div class="navbar navbar-inverse navbar-fixed-top" role="navigation">
<div class="container">
<div class="navbar-header">
<button type="button" class="navbar-toggle collapsed" data-toggle="collapse" data-target=".navbar-collapse">
<span class="sr-only">Toggle navigation</span>
<span class="icon-bar"></span>
<span class="icon-bar"></span>
<span class="icon-bar"></span>
</button>
<a class="navbar-brand" href="#">Jflow</a>
</div>
<div class="navbar-collapse collapse">
<ul class="nav navbar-nav">
<li class="active"><a href="./index.html">About</a></li>
<li><a href="./jflow-install.html">Install</a></li>
<li class="dropdown">
<a href="#" class="dropdown-toggle" data-toggle="dropdown">Core <span class="caret"></span></a>
<ul class="dropdown-menu" role="menu">
<li><a href="./jflow-core.html">Jflow overview</a></li>
<li><a href="./jflow-core-component.html">Adding component</a></li>
<li><a href="./jflow-core-workflow.html">Adding workflow</a></li>
</ul>
</li>
<li><a href="./jflow-plugin.html">JS Plugin</a></li>
<li><a href="./example1.html">Example 1</a></li>
<li><a href="./example2.html">Example 2</a></li>
<li><a target="_blank" href="https://mulcyber.toulouse.inra.fr/plugins/mediawiki/wiki/jflow/index.php/Accueil">Sources</a></li>
<li><a href="mailto:support.genopole@toulouse.inra.fr">Contact</a></li>
</ul>
</div><!--/.nav-collapse -->
</div>
</div>
<!-- Footer -->
<footer class="footer">
<div class="container">
<p>Copyright © 2014, INRA | Designed by GenoToul Bioinfo and Sigenae teams.</p>
<ul class="footer-links">
<li><a href="http://bioinfo.genotoul.fr/" target="_blank">GenoToul Bioinfo platform</a></li>
<li class="muted">&middot;</li>
<li><a href="http://www.sigenae.org/" target="_blank">Sigenae platform</a></li>
<li class="muted">&middot;</li>
<li><a href="http://www.international.inra.fr/" target="_blank">INRA</a></li>
</ul>
</div>
</footer>
<div class="container theme-showcase" role="main">
<!-- Le javascript
================================================== -->
<script type="text/javascript" src="js/jquery.min.js"></script>
<script src="js/bootstrap.min.js"></script>
<script src="js/prettify.js"></script>
<!-- Jumbotron -->
<div class="jumbotron">
<h1>Jflow</h1>