D-GENIES issueshttps://forgemia.inra.fr/genotoul-bioinfo/dgenies/-/issues2019-10-10T07:30:02+02:00https://forgemia.inra.fr/genotoul-bioinfo/dgenies/-/issues/138paf file format error2019-10-10T07:30:02+02:00Christophe Klopppaf file format errorCheck paf file format before producing the alignment. List an error.Check paf file format before producing the alignment. List an error.https://forgemia.inra.fr/genotoul-bioinfo/dgenies/-/issues/137Add "how to cite" to offline viewer2018-07-16T10:30:52+02:00Floreal CabanettesAdd "how to cite" to offline viewer1.2Floreal CabanettesFloreal Cabanettes2018-07-16https://forgemia.inra.fr/genotoul-bioinfo/dgenies/-/issues/136Show "Press Ctrl to zoom" on mouse wheel over dot plot (without ctrl key pres...2018-07-16T11:58:18+02:00Floreal CabanettesShow "Press Ctrl to zoom" on mouse wheel over dot plot (without ctrl key pressed)1.2Floreal CabanettesFloreal Cabanettes2018-07-16https://forgemia.inra.fr/genotoul-bioinfo/dgenies/-/issues/135Add a toolbox to display match properties on moseover2018-07-09T15:41:19+02:00Floreal CabanettesAdd a toolbox to display match properties on moseover1.2Floreal CabanettesFloreal Cabanettes2018-07-19https://forgemia.inra.fr/genotoul-bioinfo/dgenies/-/issues/134Add percent of succeed jobs and of type of jobs (new map or plot existing one...2018-07-05T13:31:21+02:00Floreal CabanettesAdd percent of succeed jobs and of type of jobs (new map or plot existing ones) to statistics1.1.*Floreal CabanettesFloreal Cabanetteshttps://forgemia.inra.fr/genotoul-bioinfo/dgenies/-/issues/133Job fail if input files contains spaces2018-07-05T17:53:35+02:00Floreal CabanettesJob fail if input files contains spacesFix: after upload, replace spaces by underscoreFix: after upload, replace spaces by underscore1.1.*Floreal CabanettesFloreal Cabanetteshttps://forgemia.inra.fr/genotoul-bioinfo/dgenies/-/issues/132Add doc for add new tools / new formats2018-04-13T16:51:35+02:00Floreal CabanettesAdd doc for add new tools / new formats1.1Floreal CabanettesFloreal Cabanettes2018-04-16https://forgemia.inra.fr/genotoul-bioinfo/dgenies/-/issues/131Update doc for 1.1 version2018-04-12T17:33:06+02:00Floreal CabanettesUpdate doc for 1.1 version- New run form
- Export backup in menu
- Export SVG/PNG keep the zoom- New run form
- Export backup in menu
- Export SVG/PNG keep the zoom1.1Floreal CabanettesFloreal Cabanetteshttps://forgemia.inra.fr/genotoul-bioinfo/dgenies/-/issues/130Check index files are correct, like other files2018-04-11T18:23:57+02:00Floreal CabanettesCheck index files are correct, like other files1.1Floreal CabanettesFloreal Cabanettes2018-04-12https://forgemia.inra.fr/genotoul-bioinfo/dgenies/-/issues/129Check if align file from URL is working2018-04-11T17:39:04+02:00Floreal CabanettesCheck if align file from URL is working1.1Floreal CabanettesFloreal Cabanettes2018-04-10https://forgemia.inra.fr/genotoul-bioinfo/dgenies/-/issues/128Add export and import as Tar file2018-04-10T11:21:13+02:00Floreal CabanettesAdd export and import as Tar fileExport indexes + paf file as a tar. Add an option to import it to show again the plot.Export indexes + paf file as a tar. Add an option to import it to show again the plot.1.1Floreal CabanettesFloreal Cabanettes2018-04-11https://forgemia.inra.fr/genotoul-bioinfo/dgenies/-/issues/127Add color palettes2018-04-09T10:02:21+02:00Floreal CabanettesAdd color palettes- a palette with low identity matches more visible than high identity matches (inverted)
- a plaette with all with the same color (all black)- a palette with low identity matches more visible than high identity matches (inverted)
- a plaette with all with the same color (all black)1.1Floreal CabanettesFloreal Cabanettes2018-04-09https://forgemia.inra.fr/genotoul-bioinfo/dgenies/-/issues/126Add alignment file as input instead of query and target2018-04-09T09:48:42+02:00Floreal CabanettesAdd alignment file as input instead of query and targetSupports PAF and MAF (Multiple Alignment File) formatsSupports PAF and MAF (Multiple Alignment File) formats1.1Floreal CabanettesFloreal Cabanettes2018-04-06https://forgemia.inra.fr/genotoul-bioinfo/dgenies/-/issues/125Add analytics logs2018-04-03T13:09:17+02:00Floreal CabanettesAdd analytics logsAdd logs which will save size of query/target for each runAdd logs which will save size of query/target for each run1.1Floreal CabanettesFloreal Cabanettes2018-03-15https://forgemia.inra.fr/genotoul-bioinfo/dgenies/-/issues/124Add mashmap tool2018-07-12T14:36:31+02:00Floreal CabanettesAdd mashmap toolhttps://github.com/marbl/MashMaphttps://github.com/marbl/MashMap1.2Floreal CabanettesFloreal Cabanetteshttps://forgemia.inra.fr/genotoul-bioinfo/dgenies/-/issues/123Ease integration of a new tool2018-04-03T13:11:55+02:00Floreal CabanettesEase integration of a new tool1.1Floreal CabanettesFloreal Cabanettes2018-04-06https://forgemia.inra.fr/genotoul-bioinfo/dgenies/-/issues/122Query as reference: do we need to remove noise before2018-02-21T10:33:47+01:00Floreal CabanettesQuery as reference: do we need to remove noise beforeSome queries are set as match but they contains only noise... Do we have to keep them, so?Some queries are set as match but they contains only noise... Do we have to keep them, so?https://forgemia.inra.fr/genotoul-bioinfo/dgenies/-/issues/121Check XSS and other security breaches2018-02-19T14:48:41+01:00Floreal CabanettesCheck XSS and other security breaches1.0Floreal CabanettesFloreal Cabanettes2018-02-23https://forgemia.inra.fr/genotoul-bioinfo/dgenies/-/issues/120Add a button to delete a job2018-02-16T18:03:13+01:00Floreal CabanettesAdd a button to delete a jobAdd protected jobs (for webserver mode) which cannot be deleted by this button. Or all gallery jobs are protected.Add protected jobs (for webserver mode) which cannot be deleted by this button. Or all gallery jobs are protected.1.0Floreal CabanettesFloreal Cabanettes2018-02-20https://forgemia.inra.fr/genotoul-bioinfo/dgenies/-/issues/119In standalone mode, load all jobs on startup to add them in the result menu2018-02-16T18:51:10+01:00Floreal CabanettesIn standalone mode, load all jobs on startup to add them in the result menu1.0Floreal CabanettesFloreal Cabanettes2018-02-20