D-GENIES issueshttps://forgemia.inra.fr/genotoul-bioinfo/dgenies/-/issues2018-02-22T10:55:48+01:00https://forgemia.inra.fr/genotoul-bioinfo/dgenies/-/issues/115Windows compatibility2018-02-22T10:55:48+01:00Floreal CabanettesWindows compatibilityCheck program is compatible for windows in standalone mode, and make required changes to make it compatible.Check program is compatible for windows in standalone mode, and make required changes to make it compatible.1.0Floreal CabanettesFloreal Cabanettes2018-02-23https://forgemia.inra.fr/genotoul-bioinfo/dgenies/-/issues/112Add a table beside the gallery items with times and memory usage for all items2018-02-05T16:21:19+01:00Floreal CabanettesAdd a table beside the gallery items with times and memory usage for all items1.0Floreal CabanettesFloreal Cabanettes2018-02-02https://forgemia.inra.fr/genotoul-bioinfo/dgenies/-/issues/105Improve databases2018-01-18T11:04:46+01:00Floreal CabanettesImprove databasesFor Job and Session:
- new is a classe method that create the new object from informations given (as now, but as class method) and returns it. It's called without instance a new object.
- So when we instance a new object, the Job/Sessi...For Job and Session:
- new is a classe method that create the new object from informations given (as now, but as class method) and returns it. It's called without instance a new object.
- So when we instance a new object, the Job/Session already exists. So we execute the load method in the __init__, and load method becomes private (_load)
- So we remove the load calling from other methods, not needed anymore1.0Floreal CabanettesFloreal Cabanettes2018-01-18https://forgemia.inra.fr/genotoul-bioinfo/dgenies/-/issues/104Sort: still store sorted version on unsort2018-01-29T15:31:00+01:00Floreal CabanettesSort: still store sorted version on unsortJust set if current vision is sorted or not (.sorted file)Just set if current vision is sorted or not (.sorted file)1.0Floreal CabanettesFloreal Cabanettes2018-01-19https://forgemia.inra.fr/genotoul-bioinfo/dgenies/-/issues/103Remove BDD2018-01-23T10:26:58+01:00Floreal CabanettesRemove BDDTest with 240 concurrent jobs splitted in 4 groups (4 users). 8 jobs failed because of two much opened connections.
For jobs, we can replace BDD by a file in each job folder.
For sessions, may be we can replace BDD by a storage in memo...Test with 240 concurrent jobs splitted in 4 groups (4 users). 8 jobs failed because of two much opened connections.
For jobs, we can replace BDD by a file in each job folder.
For sessions, may be we can replace BDD by a storage in memory...1.0Floreal CabanettesFloreal Cabanettes2018-01-19https://forgemia.inra.fr/genotoul-bioinfo/dgenies/-/issues/99List of query-target associations table: add coordinates2018-02-06T15:21:28+01:00Floreal CabanettesList of query-target associations table: add coordinates1.0Floreal CabanettesFloreal Cabanetteshttps://forgemia.inra.fr/genotoul-bioinfo/dgenies/-/issues/98Proposer plusieurs palettes de couleur2018-01-29T17:17:28+01:00Floreal CabanettesProposer plusieurs palettes de couleur- Normal (actuelle)
- Daltonien+
- Noir & Blanc- Normal (actuelle)
- Daltonien+
- Noir & Blanc1.0Floreal CabanettesFloreal Cabanetteshttps://forgemia.inra.fr/genotoul-bioinfo/dgenies/-/issues/96Prepare big jobs on cluster2018-01-05T16:26:38+01:00Floreal CabanettesPrepare big jobs on clusterBecause prepare step can be huge...Because prepare step can be huge...1.0Floreal CabanettesFloreal Cabanetteshttps://forgemia.inra.fr/genotoul-bioinfo/dgenies/-/issues/94Add check on file upload size server side2018-01-04T13:05:59+01:00Floreal CabanettesAdd check on file upload size server side1.0Floreal CabanettesFloreal Cabanetteshttps://forgemia.inra.fr/genotoul-bioinfo/dgenies/-/issues/91Change ORM2017-12-13T16:55:46+01:00Floreal CabanettesChange ORMPony ORM has some problems until the beginning. With new implementations it is really a problem. Try to found another ORM...Pony ORM has some problems until the beginning. With new implementations it is really a problem. Try to found another ORM...1.0Floreal CabanettesFloreal Cabanetteshttps://forgemia.inra.fr/genotoul-bioinfo/dgenies/-/issues/87Create a galery on the website to present results with...2018-01-30T18:25:34+01:00Christophe KloppCreate a galery on the website to present results with...execution times in order for the users to see the results without having to process them.execution times in order for the users to see the results without having to process them.1.0Floreal CabanettesFloreal Cabanetteshttps://forgemia.inra.fr/genotoul-bioinfo/dgenies/-/issues/85Export association table : add info of reverse2017-11-20T17:44:33+01:00Floreal CabanettesExport association table : add info of reverse+ if not reverse, - else+ if not reverse, - else1.0Floreal CabanettesFloreal Cabanetteshttps://forgemia.inra.fr/genotoul-bioinfo/dgenies/-/issues/84Cron pour vérifier les jobs locaux2017-11-21T18:34:12+01:00Floreal CabanettesCron pour vérifier les jobs locauxSi un job est started, le cron vérifie que le processus est toujours actif. Sinon il passe le job en erreur.
Se fera en même temps que le scheduler qui lancera les jobsSi un job est started, le cron vérifie que le processus est toujours actif. Sinon il passe le job en erreur.
Se fera en même temps que le scheduler qui lancera les jobs1.0Floreal CabanettesFloreal Cabanetteshttps://forgemia.inra.fr/genotoul-bioinfo/dgenies/-/issues/83Scheduler local pour les soumissions de jobs locaux2017-11-21T18:34:12+01:00Floreal CabanettesScheduler local pour les soumissions de jobs locaux1.0Floreal CabanettesFloreal Cabanetteshttps://forgemia.inra.fr/genotoul-bioinfo/dgenies/-/issues/81Disable sort on all-vs-all mode2017-11-17T11:10:06+01:00Floreal CabanettesDisable sort on all-vs-all mode1.0Floreal CabanettesFloreal Cabanetteshttps://forgemia.inra.fr/genotoul-bioinfo/dgenies/-/issues/79Mettre le target avant le query dans le formulaire2017-11-17T10:10:39+01:00Floreal CabanettesMettre le target avant le query dans le formulaire1.0Floreal CabanettesFloreal Cabanetteshttps://forgemia.inra.fr/genotoul-bioinfo/dgenies/-/issues/78input file names in the mail2017-11-17T17:23:10+01:00Christophe Kloppinput file names in the mailCould you add the input file names in the mail send to the user?
The submission date and time should also be added Could you add the input file names in the mail send to the user?
The submission date and time should also be added 1.0Floreal CabanettesFloreal Cabanetteshttps://forgemia.inra.fr/genotoul-bioinfo/dgenies/-/issues/77Revoir le système de notifications2017-11-13T15:00:25+01:00Floreal CabanettesRevoir le système de notificationsCar noty.js a ses limites...
Le placement idéal des notifications serait en top center, sauf que ça marche mal en noty.js... Voir les concurrents.Car noty.js a ses limites...
Le placement idéal des notifications serait en top center, sauf que ça marche mal en noty.js... Voir les concurrents.1.0Floreal CabanettesFloreal Cabanetteshttps://forgemia.inra.fr/genotoul-bioinfo/dgenies/-/issues/76Change restore zoom color2017-11-17T15:24:50+01:00Floreal CabanettesChange restore zoom colorLe vert fluo c'est trèèèès moyen !!!Le vert fluo c'est trèèèès moyen !!!1.0Floreal CabanettesFloreal Cabanetteshttps://forgemia.inra.fr/genotoul-bioinfo/dgenies/-/issues/72If more than 75% of contigs have length < 1% of the full fasta, do the sort a...2018-01-29T18:17:18+01:00Floreal CabanettesIf more than 75% of contigs have length < 1% of the full fasta, do the sort automaticallyChange borns if necessary!Change borns if necessary!1.0Floreal CabanettesFloreal Cabanettes