Start working on summary

lib/paf.py

@@ -502,3 +502,18 @@ class Paf:
                 if c_name in contigs_list:
                     contigs_list.remove(c_name)
         return "\n".join(contigs_list) + "\n"
+
+    def get_summary_stats(self):
+        """
+        Get summary of identity
+        :return: table with percents by category
+        """
+        self.parse_paf(False, False)
+        percents = {}
+        total = 0
+        for cat in self.lines:
+            nb_lines = len(self.lines[cat])
+            percents[cat] = nb_lines
+            total += nb_lines
+        for cat in self.lines:
+            percents[cat] /= total

srv/main.py

@@ -414,6 +414,11 @@ def no_assoc(id_res):
     abort(404)
 
 
+@app.route('/summary/<id_res>', methods=['POST'])
+def summary(id_res):
+    pass
+
+
 @app.route("/ask-upload", methods=['POST'])
 def ask_upload():
     try:

srv/templates/results.html

@@ -68,6 +68,7 @@
                 <input type="range" min="0" max="5" value="2" step="1" id="chroms-limits"/></label></p>
                 <p><input type="button" id="sort-contigs" value="Sort contigs"/></p>
                 <p><input type="button" id="hide-noise" value="Hide noise"/></p>
+                <p><input type="button" id="summary" value="Summary"/></p>
             </form>
         </div>
     </div>