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genotoul-bioinfo
D-GENIES
Commits
94393e6f
Commit
94393e6f
authored
Mar 02, 2018
by
Floreal Cabanettes
Browse files
Fix bug on launch drmaa
parent
34d44954
Changes
1
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Inline
Side-by-side
src/dgenies/lib/job_manager.py
View file @
94393e6f
...
...
@@ -388,9 +388,9 @@ class JobManager:
if
">"
in
args
:
out_file
=
self
.
paf_raw
args
=
args
[:
args
.
index
(
">"
)]
args
.
replace
(
"{target}"
,
self
.
target
.
get_path
())
\
.
replace
(
"{threads}"
,
str
(
self
.
tool
.
threads_cluster
))
\
.
replace
(
"{out}"
,
self
.
paf_raw
)
args
=
args
.
replace
(
"{target}"
,
self
.
target
.
get_path
())
\
.
replace
(
"{threads}"
,
str
(
self
.
tool
.
threads_cluster
))
\
.
replace
(
"{out}"
,
self
.
paf_raw
)
args
=
args
.
split
(
" "
)
...
...
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