Unpdate minified css and js

src/dgenies/static/js/dgenies.documentation.min.js

-if(!dgenies){throw"dgenies wasn't included!"}dgenies.documentation={};dgenies.documentation.init=function(){$("table").addClass("table table-striped");dgenies.documentation.fix_links_headers()};dgenies.documentation.fix_links_headers=function(){$("#plan").on("click","a",function(e){e.preventDefault();dgenies.documentation.goto(this)})};dgenies.documentation.goto=function(elem){let top=$($(elem).attr("href")).offset()["top"];$(window).scrollTop(top-55);$(elem).blur()};
+if(!dgenies){throw"dgenies wasn't included!"}dgenies.documentation={};/**
+ * Initialise app for documentation page
+ */dgenies.documentation.init=function(){$("table").addClass("table table-striped");dgenies.documentation.fix_links_headers()};/**
+ * Fix link in headers behavior (due to top bar fixed position - CSS)
+ */dgenies.documentation.fix_links_headers=function(){$("#plan").on("click","a",function(e){e.preventDefault();dgenies.documentation.goto(this)})};/**
+ * Scroll to a JQuery element
+ * @param elem JQuery element
+ */dgenies.documentation.goto=function(elem){let top=$($(elem).attr("href")).offset()["top"];$(window).scrollTop(top-55);$(elem).blur()};

src/dgenies/static/js/dgenies.min.js

-dgenies={};dgenies.loading="#loading";dgenies.noise=true;dgenies.mode="webserver";dgenies.init=function(all_jobs,mode){dgenies.mode=mode;let cookies=$.cookie("results");if(mode==="webserver"){cookies=cookies!==undefined&&cookies.length>0?cookies.split("|"):[]}else{cookies=all_jobs;dgenies.save_cookies(cookies)}dgenies.update_results(cookies)};dgenies.save_cookies=function(cookies){$.cookie("results",cookies.join("|"),{path:"/"})};dgenies.update_results=function(results){let job_list_item=$("ul.nav li.result ul");job_list_item.html("");if(results.length>0){for(let i=0;i<results.length;i++){let result=results[i];job_list_item.append($("<li>").append($("<a>").attr("href",`/result/${result}`).text(result)))}}else{job_list_item.append($("<li>").append($("<a>").attr("href","/run").text("Please run a job!")))}};dgenies.notify=function(text,type="warning",delay=5000){$.notify({message:text},{type:type,placement:{from:"top",align:"center"},delay:delay,animate:{enter:"animated fadeInDown",exit:"animated fadeOutUp"},offset:55,newest_on_top:true})};dgenies.show_loading=function(message="Loading...",width=118){$("input,form#export select").prop("disabled",true);d3.boxplot.all_disabled=true;$(dgenies.loading).find(".mylabel").html(message);$(dgenies.loading).find(".label").width(width);$(dgenies.loading).show();$(dgenies.loading).position({my:"center center",at:"center center",of:"#draw",collistion:"fit"})};dgenies.hide_loading=function(){$("input,form#export select").prop("disabled",false);d3.boxplot.all_disabled=false;$(dgenies.loading).hide();dgenies.reset_loading_message()};dgenies.set_loading_message=function(message){$(dgenies.loading).find(".mylabel").html(message)};dgenies.reset_loading_message=function(){$(dgenies.loading).find(".mylabel").html("Loading...");$(dgenies.loading).find(".label").width(118)};dgenies.fill_select_zones=function(x_targets,y_contigs){let select_contig=$("select#select-contig");select_contig.find("option[value!='###NONE###']").remove();for(let i=0;i<y_contigs.length;i++){let label=y_contigs[i];let value=label;if(label.startsWith("###MIX###")){let parts=label.substr(10).split("###");label="Mix: "+parts.slice(0,3).join(", ");if(parts.length>3){label+=", ..."}}select_contig.append($("<option>",{value:value,text:label}))}select_contig.chosen({disable_search_threshold:10,search_contains:true});select_contig.trigger("chosen:updated");let select_target=$("select#select-target");select_target.find("option[value!='###NONE###']").remove();for(let i=0;i<x_targets.length;i++){let label=x_targets[i];let value=label;if(label.startsWith("###MIX###")){let parts=label.substr(10).split("###");label="Mix: "+parts.slice(0,3).join(", ");if(parts.length>3){label+=", ..."}}select_target.append($("<option>",{value:value,text:label}))}select_target.chosen({disable_search_threshold:10,search_contains:true});select_target.trigger("chosen:updated")};dgenies.numberWithCommas=function(x){return x.toString().replace(/\B(?=(\d{3})+(?!\d))/g,",")};dgenies.ajax=function(url,data,success,error,method="POST"){$.ajax(url,{method:method,data:data,success:success,error:error||function(){dgenies.hide_loading();dgenies.notify("An error occurred! Please contact us to report the bug","danger")}})};dgenies.post=function(url,data,success,error,async=true){dgenies.ajax({url:url,data:data,success:success,error:error,type:"POST",async:async})};dgenies.get=function(url,data,success,error){dgenies.ajax(url,data,success,error,"GET")};
+dgenies={};dgenies.loading="#loading";dgenies.noise=true;dgenies.mode="webserver";/**
+ * Initialise dgenies client app
+ *
+ * @param {array} all_jobs list of user jobs (in standalone mode, empty in other modes)
+ * @param {string} mode server mode (standalone or webserver)
+ */dgenies.init=function(all_jobs,mode){dgenies.mode=mode;let cookies=$.cookie("results");if(mode==="webserver"){cookies=cookies!==undefined&&cookies.length>0?cookies.split("|"):[]}else{cookies=all_jobs;dgenies.save_cookies(cookies)}dgenies.update_results(cookies)};/**
+ * Save cookie on the browser
+ * @param {array} cookies list of jobs
+ */dgenies.save_cookies=function(cookies){$.cookie("results",cookies.join("|"),{path:"/"})};/**
+ * Update list of jobs
+ * @param {array} results: new list of jobs
+ */dgenies.update_results=function(results){let job_list_item=$("ul.nav li.result ul");job_list_item.html("");if(results.length>0){for(let i=0;i<results.length;i++){let result=results[i];job_list_item.append($("<li>").append($("<a>").attr("href",`/result/${result}`).text(result)))}}else{job_list_item.append($("<li>").append($("<a>").attr("href","/run").text("Please run a job!")))}};/**
+ * Show new notification
+ *
+ * @param {string} text notification text
+ * @param {string} type notification type (danger, warning, info, success) according to Bootstrap Notify library
+ * @param {int} delay time before hide notification
+ */dgenies.notify=function(text,type="warning",delay=5000){$.notify({message:text},{type:type,placement:{from:"top",align:"center"},delay:delay,animate:{enter:"animated fadeInDown",exit:"animated fadeOutUp"},offset:55,newest_on_top:true})};/**
+ * Show loading popup
+ *
+ * @param {string} message loading message
+ * @param {int} width popup width
+ */dgenies.show_loading=function(message="Loading...",width=118){$("input,form#export select").prop("disabled",true);d3.boxplot.all_disabled=true;$(dgenies.loading).find(".mylabel").html(message);$(dgenies.loading).find(".label").width(width);$(dgenies.loading).show();$(dgenies.loading).position({my:"center center",at:"center center",of:"#draw",collistion:"fit"})};/**
+ * Hide loading popup
+ */dgenies.hide_loading=function(){$("input,form#export select").prop("disabled",false);d3.boxplot.all_disabled=false;$(dgenies.loading).hide();dgenies.reset_loading_message()};/**
+ * Change loading message on current popup
+ *
+ * @param {string} message new message
+ */dgenies.set_loading_message=function(message){$(dgenies.loading).find(".mylabel").html(message)};/**
+ * Reset loading message to its default value
+ */dgenies.reset_loading_message=function(){$(dgenies.loading).find(".mylabel").html("Loading...");$(dgenies.loading).find(".label").width(118)};/**
+ * Fill list of zones on select boxes (contigs and chromosomes)
+ *
+ * @param {array} x_targets list of chromosomes of target
+ * @param {array} y_contigs list of contigs of query
+ */dgenies.fill_select_zones=function(x_targets,y_contigs){let select_contig=$("select#select-contig");select_contig.find("option[value!='###NONE###']").remove();for(let i=0;i<y_contigs.length;i++){let label=y_contigs[i];let value=label;if(label.startsWith("###MIX###")){let parts=label.substr(10).split("###");label="Mix: "+parts.slice(0,3).join(", ");if(parts.length>3){label+=", ..."}}select_contig.append($("<option>",{value:value,text:label}))}select_contig.chosen({disable_search_threshold:10,search_contains:true});select_contig.trigger("chosen:updated");let select_target=$("select#select-target");select_target.find("option[value!='###NONE###']").remove();for(let i=0;i<x_targets.length;i++){let label=x_targets[i];let value=label;if(label.startsWith("###MIX###")){let parts=label.substr(10).split("###");label="Mix: "+parts.slice(0,3).join(", ");if(parts.length>3){label+=", ..."}}select_target.append($("<option>",{value:value,text:label}))}select_target.chosen({disable_search_threshold:10,search_contains:true});select_target.trigger("chosen:updated")};/**
+ * Show human readable number higher than 1000: 1000 -> 1,000
+ *
+ * @param {int} x number
+ * @returns {string} human readable number
+ */dgenies.numberWithCommas=function(x){return x.toString().replace(/\B(?=(\d{3})+(?!\d))/g,",")};/**
+ * Ajax server call
+ *
+ * @param url url to call
+ * @param data data to send
+ * @param success success function
+ * @param error error function
+ * @param method method (GET, POST, ...)
+ */dgenies.ajax=function(url,data,success,error,method="POST"){$.ajax(url,{method:method,data:data,success:success,error:error||function(){dgenies.hide_loading();dgenies.notify("An error occurred! Please contact us to report the bug","danger")}})};/**
+ * Post server call
+ *
+ * @param url url to call
+ * @param data data to send
+ * @param success success function
+ * @param error error function
+ * @param async make call asynchronous
+ */dgenies.post=function(url,data,success,error,async=true){dgenies.ajax({url:url,data:data,success:success,error:error,type:"POST",async:async})};/**
+ * Get server call
+ *
+ * @param url url to call
+ * @param data data to send
+ * @param success success function
+ * @param error error function
+ */dgenies.get=function(url,data,success,error){dgenies.ajax(url,data,success,error,"GET")};
 String.prototype.rsplit=function(sep,maxsplit){let split=this.split(sep);return maxsplit?[split.slice(0,-maxsplit).join(sep)].concat(split.slice(-maxsplit)):split};

src/dgenies/static/js/dgenies.status.min.js

-if(!dgenies){throw"dgenies wasn't included!"}dgenies.status={};dgenies.status.mode="webserver";dgenies.status.init=function(status,mode){dgenies.status.mode=mode;if(status!=="success"&&status!=="done"&&status!=="no-match"&&status!=="fail"){dgenies.status.autoreload()}};dgenies.status.autoreload=function(){let get_p=new URLSearchParams(window.location.search);let refresh=get_p.get("refresh")!==null?parseInt(get_p.get("refresh")):1;let count=get_p.get("count")!==null?parseInt(get_p.get("count")):1;if(refresh<30){if(refresh%5===0){if(count>3){refresh+=1;count=1}else{count+=1}}else{refresh+=1}}setTimeout(function(){if(dgenies.status.mode==="webserver"){window.location.replace(`?refresh=${refresh}&count=${count}`)}else{window.location.replace(`?refresh=1&count=1`)}},refresh*1000)};
+if(!dgenies){throw"dgenies wasn't included!"}dgenies.status={};dgenies.status.mode="webserver";/**
+ * initialise the app for status page
+ *
+ * @param {string} status job status
+ * @param {string} mode server mode (standalone or webserver)
+ */dgenies.status.init=function(status,mode){dgenies.status.mode=mode;if(status!=="success"&&status!=="done"&&status!=="no-match"&&status!=="fail"){dgenies.status.autoreload()}};/**
+ * Page autoreload periodically
+ */dgenies.status.autoreload=function(){let get_p=new URLSearchParams(window.location.search);let refresh=get_p.get("refresh")!==null?parseInt(get_p.get("refresh")):1;let count=get_p.get("count")!==null?parseInt(get_p.get("count")):1;if(refresh<30){if(refresh%5===0){if(count>3){refresh+=1;count=1}else{count+=1}}else{refresh+=1}}setTimeout(function(){if(dgenies.status.mode==="webserver"){window.location.replace(`?refresh=${refresh}&count=${count}`)}else{window.location.replace(`?refresh=1&count=1`)}},refresh*1000)};