Commit 0e236994 authored by Floreal Cabanettes's avatar Floreal Cabanettes
Browse files

Change default number of threads to 4

parent 3e3f62fd
......@@ -3,7 +3,7 @@ minimap2:
command_line: "{exe} -t {threads} {target} {query} > {out}"
all_vs_all: "{exe} -t {threads} -X {target} {target} > {out}"
max_memory: 40
threads: 8
threads: 4
parser: !!null
split_before: True
help: "Better for low similar fasta files"
......@@ -14,7 +14,7 @@ mashmap:
command_line: "{exe} -t {threads} -r {target} -q {query} -o {out}"
all_vs_all: !!null
max_memory: 20
threads: 8
threads: 4
parser: mashmap2paf
split_before: False
help: "Faster for high similar fasta files"
......
......@@ -3,7 +3,7 @@ minimap2:
command_line: "{exe} -t {threads} {target} {query} > {out}"
all_vs_all: "{exe} -t {threads} -X {target} {target} > {out}"
max_memory: 40
threads: 8
threads: 4
parser: !!null
split_before: True
help: "Better for low similar fasta files"
......
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