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genotoul-bioinfo
D-GENIES
Commits
0b8a22da
Commit
0b8a22da
authored
Apr 06, 2018
by
Floreal Cabanettes
Browse files
Fix tool in database
parent
99cd5b89
Changes
1
Hide whitespace changes
Inline
Side-by-side
src/dgenies/lib/job_manager.py
View file @
0b8a22da
...
...
@@ -1119,7 +1119,7 @@ class JobManager:
j11
.
delete_instance
()
if
self
.
target
is
not
None
:
job
=
Job
.
create
(
id_job
=
self
.
id_job
,
email
=
self
.
email
,
batch_type
=
self
.
config
.
batch_system_type
,
date_created
=
datetime
.
now
(),
tool
=
self
.
tool
.
name
)
date_created
=
datetime
.
now
(),
tool
=
self
.
tool
.
name
if
self
.
tool
is
not
None
else
None
)
job
.
save
()
if
not
os
.
path
.
exists
(
self
.
output_dir
):
os
.
mkdir
(
self
.
output_dir
)
...
...
@@ -1127,7 +1127,8 @@ class JobManager:
thread
.
start
()
else
:
job
=
Job
.
create
(
id_job
=
self
.
id_job
,
email
=
self
.
email
,
batch_type
=
self
.
config
.
batch_system_type
,
date_created
=
datetime
.
now
(),
tool
=
self
.
tool
.
name
,
status
=
"fail"
)
date_created
=
datetime
.
now
(),
tool
=
self
.
tool
.
name
if
self
.
tool
is
not
None
else
None
,
status
=
"fail"
)
job
.
save
()
def
set_status_standalone
(
self
,
status
,
error
=
""
):
...
...
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