tools.yaml

minimap2:
  exec: ###SYSEXEC###/../minimap2/minimap2.exe
  command_line: "{exe} -t {threads} {target} {query} > {out}"
  all_vs_all: "{exe} -t {threads} -X {target} {target} > {out}"
  max_memory: 40
  threads: 8
  parser: !!null
  split_before: True
  help: "Better for low similar fasta files"
  order: 0