TransDecoder identifies candidate coding regions within transcript sequences, such as those generated by de novo RNA-Seq transcript assembly using Trinity, or constructed based on RNA-Seq alignments to the genome using Tophat and Cufflinks. Developer docs: https://github.com/TransDecoder/TransDecoder
https://transdecoder.github.io
transdecoder Version: 5.5.0<br>
Singularity container based on the recipe: Singularity.transdecoder_v5.5.0
Package installation using Miniconda3 V4.7.12<br>
image singularity (V>=3.3) is automaticly built (gitlab-ci) and pushed on the registry using the .gitlab-ci.yml <br>
TransDecoder identifies candidate coding regions within transcript sequences, such as those generated by de novo RNA-Seq transcript assembly using Trinity, or constructed based on RNA-Seq alignments to the genome using Tophat and Cufflinks. Developer docs: https://github.com/TransDecoder/TransDecoder
https://transdecoder.github.io
Version: 5.5.0
Package installation using Miniconda3 V4.7.12
All packages are in /opt/miniconda/bin & are in PATH