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Commit 4ce2f515 authored by Jacques Lagnel's avatar Jacques Lagnel
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update README

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README.md
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https://gatkforums.broadinstitute.org/gatk/discussion/2806/howto-apply-hard-filters-to-a-call-set
https://gatk.broadinstitute.org/hc/en-us/articles/360035890471-Hard-filtering-germline-short-variants
>[!WARNING]
>For the reference fasta file, he reference definition line must not contain space or special character
_**Warning:** For the reference fasta file, he reference definition line must not contain space or special character._
## Snakemake features: fastq from csv file, config, modules, SLURM
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