Skip to content

GitLab

Commit 22469219 authored by Jacques Lagnel's avatar Jacques Lagnel
Browse files

removed dup

parent 724315d0
Hide whitespace changes
Inline Side-by-side
allmine deleted 100644 → 0
View file @ 724315d0
"__default__" :
"alternative_proteins" :
"annovar" :
"bams_list" :
"bwa_index" :
"bwa_pe" :
"bwa_se" :
"cov_track" :
"fastp_pe" :
"fastqc_pe" :
"fastqc_se" :
"freebayes" :
"make_markdown" :
"make_report" :
"merge_bams" :
"multiqc_bam" :
"parse_bam_with_bed" :
"pe_trim_and_merge" :
"varscan" :
"vcf4_to_avinput" :
"whatshap" :
pe deleted 100644 → 0
View file @ 724315d0
"MarkDuplicates" :
"SplitNCigarReads" :
"__default__" :
"alternative_proteins" :
"annovar" :
"bam_stats" :
"bams_list" :
"bowtie2_index" :
"bowtie2_pe" :
"bowtie2_se" :
"bwa_index" :
"bwa_pe" :
"bwa_se" :
"combinevcf" :
"cov_track" :
"cutadapt_pe" :
"fastp_pe" :
"fastp_se" :
"fastqc_pe" :
"fastqc_se" :
"freebayes" :
"freebayes_parallel" :
"gatk4_combine_calls" :
"gatk4_filterIndels" :
"gatk4_filterSnps" :
"gatk4_gc" :
"gatk4_gdb" :
"gatk4_gvcf_map_file" :
"gatk4_hc" :
"gatk4_indels_quality_graphe_pdf" :
"gatk4_select_indels_variants" :
"gatk4_select_snps_variants" :
"gatk4_snps_quality_graphe_pdf" :
"keep_duplicates" :
"make_markdown" :
"make_report" :
"mergePE" :
"merge_bams" :
"multiqc_bam" :
"multiqc_fastqc" :
"parse_bam_with_bed" :
"remove_duplicates" :
"star_index" :
"star_index2" :
"star_pass1" :
"star_pass2" :
"trim_and_merge_pe" :
"varscan" :
"vcf4_to_avinput" :
"whatshap" :
rna deleted 100644 → 0
View file @ 724315d0
"MarkDuplicates" :
"SplitNCigarReads" :
"__default__" :
"alternative_proteins" :
"annovar" :
"bam_stats" :
"bams_list" :
"bowtie2_index" :
"bowtie2_pe" :
"bowtie2_se" :
"bwa_index" :
"bwa_pe" :
"bwa_se" :
"combinevcf" :
"cov_track" :
"cutadapt_pe" :
"fastp_pe" :
"fastp_se" :
"fastqc_pe" :
"fastqc_se" :
"freebayes" :
"freebayes_parallel" :
"gatk4_combine_calls" :
"gatk4_filterIndels" :
"gatk4_filterSnps" :
"gatk4_gc" :
"gatk4_gdb" :
"gatk4_gvcf_map_file" :
"gatk4_hc" :
"gatk4_indels_quality_graphe_pdf" :
"gatk4_select_indels_variants" :
"gatk4_select_snps_variants" :
"gatk4_snps_quality_graphe_pdf" :
"keep_duplicates" :
"make_markdown" :
"make_report" :
"mergePE" :
"merge_bams" :
"multiqc_bam" :
"multiqc_fastqc" :
"parse_bam_with_bed" :
"remove_duplicates" :
"star_index" :
"star_index2" :
"star_pass1" :
"star_pass2" :
"trim_and_merge_pe" :
"varscan" :
"vcf4_to_avinput" :
"whatshap" :
se deleted 100644 → 0
View file @ 724315d0
"MarkDuplicates" :
"SplitNCigarReads" :
"__default__" :
"alternative_proteins" :
"annovar" :
"bam_stats" :
"bams_list" :
"bowtie2_index" :
"bowtie2_pe" :
"bowtie2_se" :
"bwa_index" :
"bwa_pe" :
"bwa_se" :
"combinevcf" :
"cov_track" :
"cutadapt_pe" :
"fastp_pe" :
"fastp_se" :
"fastqc_pe" :
"fastqc_se" :
"freebayes" :
"freebayes_parallel" :
"gatk4_combine_calls" :
"gatk4_filterIndels" :
"gatk4_filterSnps" :
"gatk4_gc" :
"gatk4_gdb" :
"gatk4_gvcf_map_file" :
"gatk4_hc" :
"gatk4_indels_quality_graphe_pdf" :
"gatk4_select_indels_variants" :
"gatk4_select_snps_variants" :
"gatk4_snps_quality_graphe_pdf" :
"keep_duplicates" :
"make_markdown" :
"make_report" :
"mergePE" :
"merge_bams" :
"multiqc_bam" :
"multiqc_fastqc" :
"parse_bam_with_bed" :
"remove_duplicates" :
"star_index" :
"star_index2" :
"star_pass1" :
"star_pass2" :
"trim_and_merge_pe" :
"varscan" :
"vcf4_to_avinput" :
"whatshap" :
Markdown is supported
0% or .
You are about to add 0 people to the discussion. Proceed with caution.
Finish editing this message first!
Please register or to comment