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GQE-ABISoft / SHiNeMaS
GNU Affero General Public License v3.0SHiNeMaS is a database with its web interface, dedicated to the management of the history of seed lots and related data like phenotyping, environment and cultural practices. SHiNeMaS is freely available under GNU Affero GPL Licence
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Félix Hartmann / XyDyS
GNU General Public License v3.0 onlyXyDyS (Xylogenesis Dynamics Simulator) is a software for interactive exploration of computational models of wood formation.
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BIOGER / ingenannot
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Python code to map metabolites (including lipids) to metabolic networks using ontology.
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A python module to explore and use the agroecoperenne database
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URGI-Anagen / Caulifinder
MIT LicenseCaulifinder : a pipeline for automatic detection and annotation of caulimovirid endogenous viral elements in plant genomes
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PAPPSO / pappsomspp
GNU General Public License v3.0 onlyPAPPSOms++ is a comprehensive C++ library including useful functions to handle mass spectrometric data, either in a proteomics setting or for data visualization. Abstractions include peptides, proteins, isotopic clusters, mass/drift spectra...
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PAPPSO / libodsstream
OtherLightweight C++ and Java library to produce Open Document Spreadsheet (.ods) files. The main goal is to write data as simply as writing it to a simple text file (csv or tsv). Libodsstream allows yout to read and write ODS files as stream
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PAPPSO / MassChroQ
GNU General Public License v3.0 onlyMassChroQ (Mass Chromatogram Quantification) is a powerful and versatile software that performs retention time alignment, XIC extraction, peak detection and quantification on data obtained from liquid chromatography-mass spectrometry techniques.
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PAPPSO / MCQR
GNU General Public License v3.0 onlyMCQR is a comprehensive set of objects and function for R to handle MassChroQ results.
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Omnicrobe / text-mining-workflow
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